RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 GMIPQ9P107 970 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 PCDHGA2Q9Y5H1 932 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 TRDMT1O14717 391 aaKnown RBP18.72■□□□□ 0.59
TPM4-206ENST00000587201 SATB1Q01826 763 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 MORC3Q14149 939 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 CCDC40Q4G0X9 1142 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 TMEM196Q5HYL7 178 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 HECTD3Q5T447 861 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 CLEC20AQ6ZU45 233 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 FILIP1Q7Z7B0 1213 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 TTC39CQ8N584 583 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 NELFBQ8WX92 580 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 TATDN2Q93075 761 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 CHFRQ96EP1 664 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 HEXIM2Q96MH2 286 aaKnown RBP18.72■□□□□ 0.59
TPM4-206ENST00000587201 CEP63Q96MT8 703 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 FAM126AQ9BYI3 521 aaPredicted RBP18.72■□□□□ 0.59
TPM4-206ENST00000587201 FBXO44Q9H4M3 255 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 CISHQ9NSE2 258 aa18.72■□□□□ 0.59
TPM4-206ENST00000587201 BICDL2A1A5D9 508 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 FAM92AA1XBS5 289 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 PPP1R3GB7ZBB8 358 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 COCHO43405 550 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 NFATC1O95644 943 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 BMP6P22004 513 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 GALK1P51570 392 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 NRLP54845 237 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 UBE2HP62256 183 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 PPP1R26Q5T8A7 1209 aaPredicted RBP18.71■□□□□ 0.59
TPM4-206ENST00000587201 SNX30Q5VWJ9 437 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 FSTL4Q6MZW2 842 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 DDX42Q86XP3 938 aaKnown RBP eCLIP18.71■□□□□ 0.599e-6■□□□□ 9.6
TPM4-206ENST00000587201 ZBTB44Q8NCP5 570 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 NELL1Q92832 810 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 SLC35C1Q96A29 364 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 DUSP9Q99956 384 aaKnown RBP18.71■□□□□ 0.59
TPM4-206ENST00000587201 P2RY13Q9BPV8 354 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 CFAP97Q9P2B7 532 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 CTNND2Q9UQB3 1225 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 COQ4Q9Y3A0 265 aa18.71■□□□□ 0.59
TPM4-206ENST00000587201 HELZP42694 1942 aaKnown RBP18.7■□□□□ 0.58
TPM4-206ENST00000587201 ACO1P21399 889 aaKnown RBP18.7■□□□□ 0.58
TPM4-206ENST00000587201 TTI2Q6NXR4 508 aa18.7■□□□□ 0.58
TPM4-206ENST00000587201 CD101Q93033 1021 aa18.7■□□□□ 0.58
TPM4-206ENST00000587201 TMEM176AQ96HP8 235 aa18.7■□□□□ 0.58
TPM4-206ENST00000587201 ARID3AQ99856 593 aa18.7■□□□□ 0.58
TPM4-206ENST00000587201 NACA2Q9H009 215 aa18.7■□□□□ 0.58
TPM4-206ENST00000587201 CCSER2Q9H7U1 834 aa18.7■□□□□ 0.58
TPM4-206ENST00000587201 FBRSL1Q9HCM7 1045 aaKnown RBP18.7■□□□□ 0.58
TPM4-206ENST00000587201 TLR8Q9NR97 1041 aaKnown RBP18.7■□□□□ 0.58
TPM4-206ENST00000587201 HHLA1C9JL84 531 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 SLC9A3R1O14745 358 aaPredicted RBP18.69■□□□□ 0.58
TPM4-206ENST00000587201 SCAMP3O14828 347 aaKnown RBP18.69■□□□□ 0.58
TPM4-206ENST00000587201 EGFP01133 1207 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 ZDHHC11BP0C7U3 371 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 TDGF1P13385 188 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 DRD1P21728 446 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 TUBP50607 506 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 STX17P56962 302 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 LRMPQ12912 555 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 CUL2Q13617 745 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 NAIF1Q69YI7 327 aaPredicted RBP18.69■□□□□ 0.58
TPM4-206ENST00000587201 GPRIN1Q7Z2K8 1008 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 KIAA1958Q8N8K9 716 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 SLC4A11Q8NBS3 891 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 HINFPQ9BQA5 517 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 DUSP16Q9BY84 665 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 FAM124BQ9H5Z6 455 aaPredicted RBP18.69■□□□□ 0.58
TPM4-206ENST00000587201 PNPLA8Q9NP80 782 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 FANCMQ8IYD8 2048 aa18.69■□□□□ 0.58
TPM4-206ENST00000587201 MYH10P35580 1976 aa18.68■□□□□ 0.58
TPM4-206ENST00000587201 LILRB5O75023 590 aa18.68■□□□□ 0.58
TPM4-206ENST00000587201 ANP32AP39687 249 aaKnown RBP18.68■□□□□ 0.58
TPM4-206ENST00000587201 FMO5P49326 533 aa18.68■□□□□ 0.58
TPM4-206ENST00000587201 RAD23BP54727 409 aa18.68■□□□□ 0.58
TPM4-206ENST00000587201 PAK1Q13153 545 aa18.68■□□□□ 0.58
TPM4-206ENST00000587201 CAMK4Q16566 473 aa18.68■□□□□ 0.58
TPM4-206ENST00000587201 SUMF1Q8NBK3 374 aa18.68■□□□□ 0.58
TPM4-206ENST00000587201 C2orf42Q9NWW7 574 aa18.68■□□□□ 0.58
TPM4-206ENST00000587201 SCML2Q9UQR0 700 aa18.68■□□□□ 0.58
TPM4-206ENST00000587201 SH3BP1Q9Y3L3 701 aa18.68■□□□□ 0.58
TPM4-206ENST00000587201 CYP26A1O43174 497 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 TLR5O60602 858 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 RNF40O75150 1001 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 PAPSS2O95340 614 aaPredicted RBP18.67■□□□□ 0.58
TPM4-206ENST00000587201 PGFP49763 221 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 YWHAEP62258 255 aaKnown RBP18.67■□□□□ 0.58
TPM4-206ENST00000587201 FBXO43Q4G163 708 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 PKN3Q6P5Z2 889 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 FOXR2Q6PJQ5 311 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 ADGRG2Q8IZP9 1017 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 TRIML1Q8N9V2 468 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 ZFRQ96KR1 1074 aaKnown RBP18.67■□□□□ 0.58
TPM4-206ENST00000587201 KIAA1468Q9P260 1216 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 TBC1D14Q9P2M4 693 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 VPS13AQ96RL7 3174 aa18.67■□□□□ 0.58
TPM4-206ENST00000587201 E2F8A0AVK6 867 aa18.66■□□□□ 0.58
TPM4-206ENST00000587201 CHURC1-FNTBB4DL54 471 aa18.66■□□□□ 0.58
TPM4-206ENST00000587201 K7ESF4 209 aa18.66■□□□□ 0.58
TPM4-206ENST00000587201 ATG13O75143 517 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms