RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	CASP2	P42575	452 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	KRTAP10-7	P60409	375 aa	Predicted RBP	5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	NFE2	Q16621	373 aa	Predicted RBP	5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	CCL14	Q16627	93 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	TKFC	Q3LXA3	575 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	ASPRV1	Q53RT3	343 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	PRR16	Q569H4	304 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	BRDT	Q58F21	947 aa	Predicted RBP	5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	SYDE2	Q5VT97	1194 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	IQSEC1	Q6DN90	963 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	CCDC70	Q6NSX1	233 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	ANKS3	Q6ZW76	656 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	NECAB2	Q7Z6G3	386 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	DGKH	Q86XP1	1220 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	SVIP	Q8NHG7	77 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	SMG7	Q92540	1137 aa	Known RBP	5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	PTPRN2	Q92932	1015 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	MAML3	Q96JK9	1138 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	COQ10A	Q96MF6	247 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	TMEM47	Q9BQJ4	181 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	SLC46A2	Q9BY10	475 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	SLC38A10	Q9HBR0	1119 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	IL17RB	Q9NRM6	502 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	RNF146	Q9NTX7	359 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	ADAMTS5	Q9UNA0	930 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	PCDHA8	Q9Y5H6	950 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	NR2E3	Q9Y5X4	410 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	RLF	Q13129	1914 aa		5.31	□□□□□ -1.56
ZNF540-204	ENST00000586792	PLXNA1	Q9UIW2	1896 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	CCDC66	A2RUB6	948 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	CCDC69	A6NI79	296 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792		B4DLN1	442 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	KBTBD13	C9JR72	458 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792		E7EWF7	191 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	ARVCF	O00192	962 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	SCD	O00767	359 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	KCNK3	O14649	394 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	IFIT3	O14879	490 aa	Known RBP	5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	IKBKB	O14920	756 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	DAPK3	O43293	454 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	PLA2G6	O60733	806 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	ICAM1	P05362	532 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	PGK2	P07205	417 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	CYP21A2	P08686	494 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	SRGAP2C	P0DJJ0	459 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	RARB	P10826	455 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	CCND3	P30281	292 aa	Predicted RBP	5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	SDHA	P31040	664 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	CYP2C19	P33261	490 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	SLC16A2	P36021	539 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	MRPL12	P52815	198 aa	Known RBP	5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	NPEPPS	P55786	919 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	GUCY1A3	Q02108	690 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	ZNF543	Q08ER8	600 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	TRAF1	Q13077	416 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	WTAP	Q15007	396 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	SEC23A	Q15436	765 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	DGKD	Q16760	1214 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	GRAMD1B	Q3KR37	738 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	MAP3K21	Q5TCX8	1036 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	CATIP	Q7Z7H3	387 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	CREBRF	Q8IUR6	639 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	CHPF	Q8IZ52	775 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	MSL3	Q8N5Y2	521 aa	Known RBP	5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	USP6NL	Q92738	828 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	CAVIN3	Q969G5	261 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	PRDM13	Q9H4Q3	707 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	ADD3	Q9UEY8	706 aa	Known RBP	5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	DDX20	Q9UHI6	824 aa	Known RBP	5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	INTU	Q9ULD6	942 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	NOL7	Q9UMY1	257 aa	Known RBP	5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	FRMPD3	Q5JV73	1810 aa		5.3	□□□□□ -1.56
ZNF540-204	ENST00000586792	BICDL2	A1A5D9	508 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	PTPDC1	A2A3K4	754 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	ASB14	A6NK59	587 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	SEPT4	O43236	478 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	TOX4	O94842	621 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	REC8	O95072	547 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	MYL3	P08590	195 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	GOLGA8H	P0CJ92	632 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	AKR1A1	P14550	325 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	KIF5B	P33176	963 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	MCM5	P33992	734 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	ALDH6A1	Q02252	535 aa	Known RBP	5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	MAPK7	Q13164	816 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	RAB33A	Q14088	237 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	SPIDR	Q14159	915 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	KRT32	Q14532	448 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	TMEM95	Q3KNT9	176 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	USH1G	Q495M9	461 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	C10orf62	Q5T681	223 aa	Predicted RBP	5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	LCE1A	Q5T7P2	110 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	SYNE3	Q6ZMZ3	975 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	GET4	Q7L5D6	327 aa	Predicted RBP	5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	RASGRP2	Q7LDG7	609 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	RNF180	Q86T96	592 aa		5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	CXorf67	Q86X51	503 aa	Predicted RBP	5.29	□□□□□ -1.56
ZNF540-204	ENST00000586792	ARHGEF19	Q8IW93	802 aa		5.29	□□□□□ -1.56

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