RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 CCDC142Q17RM4 750 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 ITPRIPL2Q3MIP1 535 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 DGKKQ5KSL6 1271 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 SDHAF4Q5VUM1 108 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 SNX30Q5VWJ9 437 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 ANKRD40Q6AI12 368 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 ZC3H14Q6PJT7 736 aaKnown RBP13.11□□□□□ -0.31
ERCC2-207ENST00000586441 PAQR9Q6ZVX9 377 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 CNGA4Q8IV77 575 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 NUP93Q8N1F7 819 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 C17orf53Q8N3J3 647 aaPredicted RBP13.11□□□□□ -0.31
ERCC2-207ENST00000586441 FBXL13Q8NEE6 735 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 CEP63Q96MT8 703 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 NAA15Q9BXJ9 866 aaKnown RBP13.11□□□□□ -0.31
ERCC2-207ENST00000586441 SRRTQ9BXP5 876 aaKnown RBP13.11□□□□□ -0.31
ERCC2-207ENST00000586441 SDCBP2Q9H190 292 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 CHRDQ9H2X0 955 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 DPEP3Q9H4B8 488 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 METTL14Q9HCE5 456 aaKnown RBP13.11□□□□□ -0.31
ERCC2-207ENST00000586441 GKN1Q9NS71 199 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 ARHGAP26Q9UNA1 814 aa13.11□□□□□ -0.31
ERCC2-207ENST00000586441 RIF1Q5UIP0 2472 aaKnown RBP13.11□□□□□ -0.31
ERCC2-207ENST00000586441 PTPRZ1P23471 2315 aaPredicted RBP13.1□□□□□ -0.31
ERCC2-207ENST00000586441 ZNF840PA6NDX5 716 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 TNFRSF10BO14763 440 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 LAMTOR5O43504 91 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 OLFM2O95897 454 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 SP9P0CG40 484 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 CHRNB1P11230 501 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 CD72P21854 359 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 CTHP32929 405 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 GCLMP48507 274 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 TUBP50607 506 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 CDR1P51861 262 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 KPNA1P52294 538 aaPredicted RBP13.1□□□□□ -0.31
ERCC2-207ENST00000586441 NDST1P52848 882 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 SLC7A9P82251 487 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 RUNX3Q13761 415 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 LRRC32Q14392 662 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 PPP2R5DQ14738 602 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 CC2D1AQ6P1N0 951 aaPredicted RBP13.1□□□□□ -0.31
ERCC2-207ENST00000586441 FUKQ8N0W3 1084 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 CCAR2Q8N163 923 aaKnown RBP13.1□□□□□ -0.31
ERCC2-207ENST00000586441 TAS1R2Q8TE23 839 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 NELL1Q92832 810 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 IQCDQ96DY2 449 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 HNRNPABQ99729 332 aaKnown RBP13.1□□□□□ -0.31
ERCC2-207ENST00000586441 DUSP9Q99956 384 aaKnown RBP13.1□□□□□ -0.31
ERCC2-207ENST00000586441 NT5C1AQ9BXI3 368 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 ZNF518BQ9C0D4 1074 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 NIF3L1Q9GZT8 377 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 PNPLA8Q9NP80 782 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 DMAP1Q9NPF5 467 aaPredicted RBP13.1□□□□□ -0.31
ERCC2-207ENST00000586441 RAB20Q9NX57 234 aa13.1□□□□□ -0.31
ERCC2-207ENST00000586441 PATJQ8NI35 1801 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 A0A1W2PQC6 194 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 GOLGA6L9A6NEM1 432 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 LGALS16A8MUM7 142 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 SPECC1L-ADORA2AF8WAN1 911 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 TEX33O43247 280 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 TRIM49P0CI25 452 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 TRIM49CP0CI26 452 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 YWHAQP27348 245 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 MXI1P50539 228 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 WDR44Q5JSH3 913 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 FRMD5Q7Z6J6 570 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 ACOT1Q86TX2 421 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 FAM35AQ86V20 835 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 MAML2Q8IZL2 1156 aaPredicted RBP13.09□□□□□ -0.31
ERCC2-207ENST00000586441 STKLD1Q8NE28 680 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 NKD2Q969F2 451 aaPredicted RBP13.09□□□□□ -0.31
ERCC2-207ENST00000586441 PHOX2BQ99453 314 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
ERCC2-207ENST00000586441 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 LMAN1LQ9HAT1 526 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 SPATA6Q9NWH7 488 aaPredicted RBP13.09□□□□□ -0.31
ERCC2-207ENST00000586441 TAB2Q9NYJ8 693 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 GTSE1Q9NYZ3 720 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 ARMCX3Q9UH62 379 aaPredicted RBP13.09□□□□□ -0.31
ERCC2-207ENST00000586441 CCL26Q9Y258 94 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 FAM186AA6NE01 2351 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 ZFHX2Q9C0A1 2572 aaPredicted RBP13.09□□□□□ -0.31
ERCC2-207ENST00000586441 MYH10P35580 1976 aa13.09□□□□□ -0.31
ERCC2-207ENST00000586441 TRIM49BA6NDI0 452 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 CLDN5O00501 218 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 TRDMT1O14717 391 aaKnown RBP13.08□□□□□ -0.32
ERCC2-207ENST00000586441 ZSCAN12O43309 604 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 LRRN2O75325 713 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 CILPO75339 1184 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 PAPSS2O95340 614 aaPredicted RBP13.08□□□□□ -0.32
ERCC2-207ENST00000586441 OAS1P00973 400 aaKnown RBP13.08□□□□□ -0.32
ERCC2-207ENST00000586441 CKMP06732 381 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 ZDHHC11BP0C7U3 371 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 TNNT1P13805 278 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 HOXA6P31267 233 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 NRLP54845 237 aa13.08□□□□□ -0.32
ERCC2-207ENST00000586441 USP46P62068 366 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms