RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 KRT31Q15323 416 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 HECTD3Q5T447 861 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 STXBP5Q5T5C0 1151 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 TXNDC8Q6A555 127 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 CC2D1AQ6P1N0 951 aaPredicted RBP14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 RRAGAQ7L523 313 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 CSGALNACT1Q8TDX6 532 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 PBXIP1Q96AQ6 731 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 KREMEN1Q96MU8 473 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 IER2Q9BTL4 223 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 LRFN3Q9BTN0 628 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 CBX8Q9HC52 389 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 C11orf16Q9NQ32 467 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 CYLDQ9NQC7 956 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 TAB2Q9NYJ8 693 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 CLIC5Q9NZA1 410 aa14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 ARIH1Q9Y4X5 557 aaPredicted RBP14.57□□□□□ -0.08
PRKCSH-202ENST00000585540 HELZP42694 1942 aaKnown RBP14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 BECN2A8MW95 431 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 SLC9A3R1O14745 358 aaPredicted RBP14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 SART1O43290 800 aaKnown RBP14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 NARSO43776 548 aaKnown RBP14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 BEST1O76090 585 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 RALAP11233 206 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 KRT5P13647 590 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 SLC9A1P19634 815 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 CDK11BP21127 795 aaKnown RBP14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 GDI1P31150 447 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 USP46P62068 366 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 PTK2Q05397 1052 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 MLF2Q15773 248 aaPredicted RBP14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 GOLGA7BQ2TAP0 167 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 PKDCCQ504Y2 493 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 PIGZQ86VD9 579 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 STK32AQ8WU08 396 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 USP13Q92995 863 aaPredicted RBP14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 CRACR2AQ9BSW2 395 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 TRIM62Q9BVG3 475 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 TRPC7Q9HCX4 862 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 CNGB3Q9NQW8 809 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 HCN4Q9Y3Q4 1203 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 MYO16Q9Y6X6 1858 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 C5orf42Q9H799 3197 aa14.56□□□□□ -0.08
PRKCSH-202ENST00000585540 LGALS16A8MUM7 142 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 NCAM2O15394 837 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 CFHP08603 1231 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 ATP1A3P13637 1013 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 GNA15P30679 374 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 VIPR2P41587 438 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 ACADSBP45954 432 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 CDR1P51861 262 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 SNX16P57768 344 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 MTF1Q14872 753 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 ZNF77Q15935 545 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 FILIP1LQ4L180 1135 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 PM20D1Q6GTS8 502 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 POTEHQ6S545 545 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 LRSAM1Q6UWE0 723 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 LUZP1Q86V48 1076 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 TTC30AQ86WT1 665 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 SIX5Q8N196 739 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 IRGQQ8WZA9 623 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 KAT5Q92993 513 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 OTUB2Q96DC9 234 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 RPP25Q9BUL9 199 aaKnown RBP14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 DDX23Q9BUQ8 820 aaKnown RBP14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 LRRC4Q9HBW1 653 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 SIX2Q9NPC8 291 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 OLA1Q9NTK5 396 aaKnown RBP14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 DNAJC12Q9UKB3 198 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 CEP83Q9Y592 693 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 COL4A2P08572 1712 aa14.55□□□□□ -0.08
PRKCSH-202ENST00000585540 M0QYV0 167 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 ARNTLO00327 626 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 NRG2O14511 850 aaPredicted RBP14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 TLR5O60602 858 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 FBXO21O94952 628 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 PRAMEF12O95522 483 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 UCHL3P15374 230 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 COPB1P53618 953 aaKnown RBP14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 PDE4CQ08493 712 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 IFRD2Q12894 506 aaPredicted RBP14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 SLC44A4Q53GD3 710 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 KLHDC7AQ5VTJ3 777 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 ASTLQ6HA08 431 aaPredicted RBP14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 HFE2Q6ZVN8 426 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 SIX6OS1Q8N1H7 587 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 SCAMP5Q8TAC9 235 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 ERGIC2Q96RQ1 377 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 PLA2G2FQ9BZM2 168 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 NACA2Q9H009 215 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 IRF2BPLQ9H1B7 796 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 VPS16Q9H269 839 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 TSPY26PQ9H489 355 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 GMIPQ9P107 970 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 TBC1D14Q9P2M4 693 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 PCDHGC3Q9UN70 934 aa14.54□□□□□ -0.08
PRKCSH-202ENST00000585540 KANSL1LA0AUZ9 987 aa14.53□□□□□ -0.08
PRKCSH-202ENST00000585540 E2F8A0AVK6 867 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms