RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ZNF233A6NK53 670 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 SRRM3A6NNA2 597 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-221ENST00000583080 CLDN5O00501 218 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 ITPKAP23677 461 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 HOXD13P35453 343 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 GRIA2P42262 883 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 PPP3CCP48454 512 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 COL9A2Q14055 689 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-221ENST00000583080 DUOXA2Q1HG44 320 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 HSF5Q4G112 596 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-221ENST00000583080 PEAR1Q5VY43 1037 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-221ENST00000583080 CCDC73Q6ZRK6 1079 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 TRAPPC11Q7Z392 1133 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 OR6B3Q8NGW1 331 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 SNX25Q9H3E2 840 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 EHD2Q9NZN4 543 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 PILRBQ9UKJ0 227 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 KLK13Q9UKR3 277 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 PCDH15Q96QU1 1955 aa17.2■□□□□ 0.34
SREBF1-221ENST00000583080 MYO18AQ92614 2054 aaKnown RBP17.19■□□□□ 0.34
SREBF1-221ENST00000583080 A0A0A0MRY4 1105 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 KIAA0391O15091 583 aaKnown RBP17.19■□□□□ 0.34
SREBF1-221ENST00000583080 CST3P01034 146 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-221ENST00000583080 CFIP05156 583 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 DLATP10515 647 aaKnown RBP17.19■□□□□ 0.34
SREBF1-221ENST00000583080 PTPN1P18031 435 aaKnown RBP17.19■□□□□ 0.34
SREBF1-221ENST00000583080 GNL1P36915 607 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-221ENST00000583080 SURF1Q15526 300 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 TDRD10Q5VZ19 366 aaKnown RBP17.19■□□□□ 0.34
SREBF1-221ENST00000583080 SLC23A3Q6PIS1 610 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 PIP4P1Q86T03 277 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 ETFBKMTQ8IXQ9 262 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 PGBD3Q8N328 593 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 DEFB119Q8N690 84 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 NAT16Q8N8M0 369 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 WBP2Q969T9 261 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 SLITRK1Q96PX8 696 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 B3GNT5Q9BYG0 378 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 ELOVL4Q9GZR5 314 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 HCN2Q9UL51 889 aa17.19■□□□□ 0.34
SREBF1-221ENST00000583080 COCHO43405 550 aa17.18■□□□□ 0.34
SREBF1-221ENST00000583080 TACC1O75410 805 aa17.18■□□□□ 0.34
SREBF1-221ENST00000583080 DDX42Q86XP3 938 aaKnown RBP eCLIP17.18■□□□□ 0.34
SREBF1-221ENST00000583080 PDILTQ8N807 584 aa17.18■□□□□ 0.34
SREBF1-221ENST00000583080 FBXO32Q969P5 355 aa17.18■□□□□ 0.34
SREBF1-221ENST00000583080 SLC32A1Q9H598 525 aa17.18■□□□□ 0.34
SREBF1-221ENST00000583080 NEUROG3Q9Y4Z2 214 aa17.18■□□□□ 0.34
SREBF1-221ENST00000583080 PCNX2A6NKB5 2137 aa17.18■□□□□ 0.34
SREBF1-221ENST00000583080 E2F8A0AVK6 867 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-221ENST00000583080 TRIM24O15164 1050 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 TULP3O75386 442 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 GABRG2P18507 467 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 YWHAQP27348 245 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 TNFRSF4P43489 277 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 TNNC1P63316 161 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 FAM193AP78312 1265 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 SIM1P81133 766 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-221ENST00000583080 RPL6Q02878 288 aaKnown RBP17.17■□□□□ 0.34
SREBF1-221ENST00000583080 SEMA3BQ13214 749 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 SNRNP35Q16560 246 aaKnown RBP17.17■□□□□ 0.34
SREBF1-221ENST00000583080 WDR72Q3MJ13 1102 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 MIB1Q86YT6 1006 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 BBS7Q8IWZ6 715 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 CCDC65Q8IXS2 484 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 ZNF513Q8N8E2 541 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-221ENST00000583080 RDH13Q8NBN7 331 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 B3GALNT2Q8NCR0 500 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 OR2I1PQ8NGU4 316 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 CCDC127Q96BQ5 260 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 ERLEC1Q96DZ1 483 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 KCNK16Q96T55 309 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 CGRRF1Q99675 332 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 GTPBP2Q9BX10 602 aaKnown RBP17.17■□□□□ 0.34
SREBF1-221ENST00000583080 GZF1Q9H116 711 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-221ENST00000583080 CCSER2Q9H7U1 834 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 CALCOCO1Q9P1Z2 691 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 TBC1D14Q9P2M4 693 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 CEP192Q8TEP8 1941 aa17.17■□□□□ 0.34
SREBF1-221ENST00000583080 TBC1D3BA6NDS4 549 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 HOXC11O43248 304 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-221ENST00000583080 TNNI1P19237 187 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 WASP42768 502 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 GAD2Q05329 585 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 CYP24A1Q07973 514 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 SPDYCQ5MJ68 293 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 C10orf76Q5T2E6 689 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 NUP93Q8N1F7 819 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 SCAMP5Q8TAC9 235 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 USP28Q96RU2 1077 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 SMYD3Q9H7B4 428 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 CAPN10Q9HC96 672 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 AGPAT3Q9NRZ7 376 aa17.16■□□□□ 0.34
SREBF1-221ENST00000583080 A8MXQ7 604 aa17.15■□□□□ 0.34
SREBF1-221ENST00000583080 TGFB1I1O43294 461 aa17.15■□□□□ 0.34
SREBF1-221ENST00000583080 AP5Z1O43299 807 aa17.15■□□□□ 0.34
SREBF1-221ENST00000583080 IRF1P10914 325 aa17.15■□□□□ 0.34
SREBF1-221ENST00000583080 HOXB2P14652 356 aa17.15■□□□□ 0.34
SREBF1-221ENST00000583080 HOXD12P35452 270 aa17.15■□□□□ 0.34
SREBF1-221ENST00000583080 DPP6P42658 865 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms