RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	ZNF667	Q5HYK9	610 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	EMC10	Q5UCC4	262 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	RHBDF2	Q6PJF5	856 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	PAQR9	Q6ZVX9	377 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	ACOT1	Q86TX2	421 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	ALLC	Q8N6M5	410 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	KIAA0895	Q8NCT3	520 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	MDGA1	Q8NFP4	955 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	PARD3B	Q8TEW8	1205 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	SNX21	Q969T3	373 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	PAGE5	Q96GU1	130 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	CHAMP1	Q96JM3	812 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	CCSER2	Q9H7U1	834 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	KRT82	Q9NSB4	513 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	GMIP	Q9P107	970 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	CGN	Q9P2M7	1197 aa	Known RBP	12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	HMGXB4	Q9UGU5	601 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	EBF1	Q9UH73	591 aa		12.35	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114		A0A1B0GVL5	298 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	SLC9A3R1	O14745	358 aa	Predicted RBP	12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	ACTN4	O43707	911 aa	Known RBP	12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	FOXD2	O60548	495 aa	Predicted RBP	12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	KRT37	O76014	449 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	RTN3	O95197	1032 aa	Predicted RBP	12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	KAT7	O95251	611 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	KLF8	O95600	359 aa	Predicted RBP	12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	CAVIN2	O95810	425 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	C4BPA	P04003	597 aa	Known RBP	12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	FAM163B	P0C2L3	166 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	ADH5	P11766	374 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	PGF	P49763	221 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	USP39	Q53GS9	565 aa	Known RBP	12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	LY6G5C	Q5SRR4	150 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	CEP135	Q66GS9	1140 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	RNF43	Q68DV7	783 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	SPOPL	Q6IQ16	392 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	TMEM92	Q6UXU6	159 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	NAT16	Q8N8M0	369 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	TXNDC5	Q8NBS9	432 aa	Known RBP	12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	RLN3	Q8WXF3	142 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	WBP2	Q969T9	261 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	JAKMIP2	Q96AA8	810 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	PNKP	Q96T60	521 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	ARHGEF4	Q9NR80	690 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	VPS45	Q9NRW7	570 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	FAM49B	Q9NUQ9	324 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	MMP17	Q9ULZ9	603 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	SH3BP1	Q9Y3L3	701 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	PCDHGA5	Q9Y5G8	931 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	ATP8B3	O60423	1300 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	ABCA7	Q8IZY2	2146 aa		12.34	□□□□□ -0.43
CDK5RAP3-223	ENST00000582114	SGK1	O00141	431 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	TNFRSF10B	O14763	440 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	BEST1	O76090	585 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	ADH1C	P00326	375 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	NR3C1	P04150	777 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	APOD	P05090	189 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	SLFN14	P0C7P3	912 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	NDST1	P52848	882 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	LIMK1	P53667	647 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	MAP3K7CL	P57077	242 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	CRY1	Q16526	586 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	HECTD3	Q5T447	861 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	DDX42	Q86XP3	938 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	FUK	Q8N0W3	1084 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	C12orf29	Q8N999	325 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	IL17RC	Q8NAC3	791 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	PDZD8	Q8NEN9	1154 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	ZMIZ2	Q8NF64	920 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	CCDC26	Q8TAB7	109 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	GOLGA5	Q8TBA6	731 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	SLC2A14	Q8TDB8	520 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	DDX1	Q92499	740 aa	Known RBP	12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	ERLEC1	Q96DZ1	483 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	SMARCD1	Q96GM5	515 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	TNIP3	Q96KP6	325 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	ZFR	Q96KR1	1074 aa	Known RBP	12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	SMO	Q99835	787 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	EDEM2	Q9BV94	578 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	NACA2	Q9H009	215 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	VRTN	Q9H8Y1	702 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	DMAP1	Q9NPF5	467 aa	Predicted RBP	12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	DMAC2	Q9NW81	257 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	CFAP45	Q9UL16	551 aa		12.33	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	THADA	Q6YHU6	1953 aa		12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	TPR	P12270	2363 aa	Known RBP	12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	BCLAF3	A2AJT9	711 aa	Known RBP	12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	C4orf47	A7E2U8	309 aa		12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	PATE3	B3GLJ2	98 aa		12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	TM4SF5	O14894	197 aa		12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	TBX18	O95935	607 aa		12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	PRR29	P0C7W0	189 aa		12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	PFKFB1	P16118	471 aa		12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	ADORA2B	P29275	332 aa		12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	PIK3CA	P42336	1068 aa		12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	DHPS	P49366	369 aa	Predicted RBP	12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	AP3M2	P53677	418 aa		12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	MRPS21	P82921	87 aa	Known RBP	12.32	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	ANO4	Q32M45	955 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms