RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CUL2Q13617 745 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 ZNF528Q3MIS6 628 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 DGKKQ5KSL6 1271 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 HECTD3Q5T447 861 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 PPP1R26Q5T8A7 1209 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-220ENST00000581707 SNX30Q5VWJ9 437 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 MAMSTRQ6ZN01 415 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 CPA6Q8N4T0 437 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 SLC4A11Q8NBS3 891 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 ATP2A3Q93084 1043 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 NKD2Q969F2 451 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-220ENST00000581707 TMEM176AQ96HP8 235 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 ECT2Q9H8V3 914 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 RBM12Q9NTZ6 932 aaKnown RBP20.62■□□□□ 0.89
SREBF1-220ENST00000581707 SMPD4Q9NXE4 827 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 GMIPQ9P107 970 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 R4GN57 208 aa20.62■□□□□ 0.89
SREBF1-220ENST00000581707 RIF1Q5UIP0 2472 aaKnown RBP20.62■□□□□ 0.89
SREBF1-220ENST00000581707 PMM2O15305 246 aa20.61■□□□□ 0.89
SREBF1-220ENST00000581707 GNA14O95837 355 aa20.61■□□□□ 0.89
SREBF1-220ENST00000581707 ZDHHC11BP0C7U3 371 aa20.61■□□□□ 0.89
SREBF1-220ENST00000581707 MBL2P11226 248 aaPredicted RBP20.61■□□□□ 0.89
SREBF1-220ENST00000581707 LRMPQ12912 555 aa20.61■□□□□ 0.89
SREBF1-220ENST00000581707 EML3Q32P44 896 aa20.61■□□□□ 0.89
SREBF1-220ENST00000581707 ZC3H14Q6PJT7 736 aaKnown RBP20.61■□□□□ 0.89
SREBF1-220ENST00000581707 JAKMIP2Q96AA8 810 aa20.61■□□□□ 0.89
SREBF1-220ENST00000581707 SRRTQ9BXP5 876 aaKnown RBP20.61■□□□□ 0.89
SREBF1-220ENST00000581707 DUSP16Q9BY84 665 aa20.61■□□□□ 0.89
SREBF1-220ENST00000581707 LINC00597Q9H2U6 94 aa20.61■□□□□ 0.89
SREBF1-220ENST00000581707 PNPLA8Q9NP80 782 aa20.61■□□□□ 0.89
SREBF1-220ENST00000581707 WDR87Q6ZQQ6 2873 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 FANCMQ8IYD8 2048 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 HHLA1C9JL84 531 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 COCHO43405 550 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 FGFR1OPO95684 399 aaKnown RBP20.6■□□□□ 0.89
SREBF1-220ENST00000581707 TUBP50607 506 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 YWHAEP62258 255 aaKnown RBP20.6■□□□□ 0.89
SREBF1-220ENST00000581707 CETN1Q12798 172 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 NR1H3Q13133 447 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 CCINQ13939 588 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 GAS6Q14393 721 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 ASCL5Q7RTU5 278 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 GPRIN1Q7Z2K8 1008 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 DDX42Q86XP3 938 aaKnown RBP eCLIP20.6■□□□□ 0.89
SREBF1-220ENST00000581707 KIAA1958Q8N8K9 716 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 CHFRQ96EP1 664 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 SEMA4AQ9H3S1 761 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 CCSER2Q9H7U1 834 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 PRMT8Q9NR22 394 aaPredicted RBP20.6■□□□□ 0.89
SREBF1-220ENST00000581707 TLR8Q9NR97 1041 aaKnown RBP20.6■□□□□ 0.89
SREBF1-220ENST00000581707 SCML2Q9UQR0 700 aa20.6■□□□□ 0.89
SREBF1-220ENST00000581707 PRR23AA6NEV1 266 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 TRDMT1O14717 391 aaKnown RBP20.59■□□□□ 0.89
SREBF1-220ENST00000581707 P4HA2O15460 535 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 ACO1P21399 889 aaKnown RBP20.59■□□□□ 0.89
SREBF1-220ENST00000581707 TBXAS1P24557 533 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-220ENST00000581707 GJA4P35212 333 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 CCR3P51677 355 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 GRSF1Q12849 480 aaKnown RBP eCLIP20.59■□□□□ 0.89
SREBF1-220ENST00000581707 TMEM196Q5HYL7 178 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 TSSK4Q6SA08 328 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 TRIM59Q8IWR1 403 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 SYNPOQ8N3V7 929 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 SPEM1Q8N4L4 309 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 CLSTN2Q9H4D0 955 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 CFAP97Q9P2B7 532 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 RWDD2AQ9UIY3 292 aa20.59■□□□□ 0.89
SREBF1-220ENST00000581707 MYO16Q9Y6X6 1858 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 PTPRZ1P23471 2315 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-220ENST00000581707 SLC9A3R1O14745 358 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-220ENST00000581707 NFATC1O95644 943 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 CXCL12P48061 93 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 PGFP49763 221 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 MARSP56192 900 aaKnown RBP20.58■□□□□ 0.89
SREBF1-220ENST00000581707 KCNH2Q12809 1159 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 PPP2R5DQ14738 602 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 ARHGAP17Q68EM7 881 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 CLEC17AQ6ZS10 378 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 Q6ZS52 159 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 EXOC4Q96A65 974 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 NT5C1BQ96P26 610 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 NACA2Q9H009 215 aa20.58■□□□□ 0.89
SREBF1-220ENST00000581707 TLR5O60602 858 aa20.57■□□□□ 0.88
SREBF1-220ENST00000581707 CCDC192P0DO97 292 aa20.57■□□□□ 0.88
SREBF1-220ENST00000581707 GALK1P51570 392 aa20.57■□□□□ 0.88
SREBF1-220ENST00000581707 KIF11P52732 1056 aa20.57■□□□□ 0.88
SREBF1-220ENST00000581707 FSTL4Q6MZW2 842 aa20.57■□□□□ 0.88
SREBF1-220ENST00000581707 ADGRG2Q8IZP9 1017 aa20.57■□□□□ 0.88
SREBF1-220ENST00000581707 ZFRQ96KR1 1074 aaKnown RBP20.57■□□□□ 0.88
SREBF1-220ENST00000581707 P2RY13Q9BPV8 354 aa20.57■□□□□ 0.88
SREBF1-220ENST00000581707 FBRSL1Q9HCM7 1045 aaKnown RBP20.57■□□□□ 0.88
SREBF1-220ENST00000581707 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.57■□□□□ 0.88
SREBF1-220ENST00000581707 FAM186AA6NE01 2351 aa20.57■□□□□ 0.88
SREBF1-220ENST00000581707 E2F8A0AVK6 867 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 SCAMP3O14828 347 aaKnown RBP20.56■□□□□ 0.88
SREBF1-220ENST00000581707 CYP26A1O43174 497 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 SLC8A3P57103 927 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 SATB1Q01826 763 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 SGO2Q562F6 1265 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 NAIF1Q69YI7 327 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms