RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 FAM153BP0C7A2 387 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 COL6A1P12109 1028 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TYMPP19971 482 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PAX3P23760 479 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SCNN1AP37088 669 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CETN2P41208 172 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 NDUFV1P49821 464 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 COPS2P61201 443 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 HLTFQ14527 1009 aaKnown RBP eCLIP15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAM153CQ494X1 144 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CTU1Q7Z7A3 348 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DEFB128Q7Z7B8 93 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SEC14L1Q92503 715 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ZBTB9Q96C00 473 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CASD1Q96PB1 797 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAM193BQ96PV7 902 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 KCNK16Q96T55 309 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAM153AQ9UHL3 310 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PCDHB8Q9UN66 801 aa15.54■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PTPN7P35236 360 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TFDP3Q5H9I0 405 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAM171BQ6P995 826 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 EMBQ6PCB8 327 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 KCTD13Q8WZ19 329 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAM149B1Q96BN6 582 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SMARCD1Q96GM5 515 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 RAB17Q9H0T7 212 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 NRDE2Q9H7Z3 1164 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 LRRC4Q9HBW1 653 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAM53CQ9NYF3 392 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 RASAL2Q9UJF2 1139 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 LRFN2Q9ULH4 789 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ATP11BQ9Y2G3 1177 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 KDELR1P24390 212 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TKTL1P51854 596 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ATXN1P54253 815 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 HDAC4P56524 1084 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 YWHAHQ04917 246 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CUL1Q13616 776 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DUPD1Q68J44 220 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FBXO46Q6PJ61 603 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 LRRTM3Q86VH5 581 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SIX6OS1Q8N1H7 587 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 HAUS1Q96CS2 278 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TOX2Q96NM4 488 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ERP44Q9BS26 406 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 C11orf84Q9BUA3 381 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TBX21Q9UL17 535 aa15.53■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ARHGEF37A1IGU5 675 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PRPSAP2O60256 369 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CAPN15O75808 1086 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ECEL1O95672 775 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 BDNFP23560 247 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PTPN9P43378 593 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 MRPS5P82675 430 aaKnown RBP15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 NPAS4Q8IUM7 802 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CRIPAKQ8N1N5 446 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CAVIN3Q969G5 261 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 RUNDC3BQ96NL0 473 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ULBP1Q9BZM6 244 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 GPATCH2LQ9NWQ4 482 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 COL4A6Q14031 1691 aa15.52■□□□□ 0.07
CDK5RAP3-218ENST00000580391 HHLA1C9JL84 531 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 NRP1O14786 923 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 HSF2BPO75031 334 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DAB1O75553 588 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TJP3O95049 919 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 OR4Q2P0C623 313 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 HSPA8P11142 646 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DYNLT1P63172 113 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TSPY1Q01534 308 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 KRT17Q04695 432 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TAZQ16635 292 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 EFHC1Q5JVL4 640 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SCYL2Q6P3W7 929 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 HFE2Q6ZVN8 426 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ARCQ7LC44 396 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DEFB106AQ8N104 65 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 THEM5Q8N1Q8 247 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TSEN2Q8NCE0 465 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CMASQ8NFW8 434 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TBCBQ99426 244 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DDX23Q9BUQ8 820 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 FAM114A2Q9NRY5 505 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 MARCH5Q9NX47 278 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 HPCAL4Q9UM19 191 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SNX24Q9Y343 169 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 COL4A4P53420 1690 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PBX3P40426 434 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PITX1P78337 314 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CCNG2Q16589 344 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 RAB41Q5JT25 222 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 C1orf53Q5VUE5 145 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 OTUD1Q5VV17 481 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 KCTD6Q8NC69 237 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SLCO2A1Q92959 643 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ARMC5Q96C12 935 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CCDC114Q96M63 670 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SNRNP25Q9BV90 132 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms