RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 DHX32Q7L7V1 743 aaKnown RBP6.55□□□□□ -1.36
CCDC178-209ENST00000579947 CHPFQ8IZ52 775 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 CCDC82Q8N4S0 544 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 GIPC2Q8TF65 315 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 C2orf15Q8WU43 125 aaKnown RBP6.55□□□□□ -1.36
CCDC178-209ENST00000579947 SLC22A12Q96S37 553 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 ZNF71Q9NQZ8 489 aaPredicted RBP6.55□□□□□ -1.36
CCDC178-209ENST00000579947 PRMT7Q9NVM4 692 aaPredicted RBP6.55□□□□□ -1.36
CCDC178-209ENST00000579947 ANAPC1Q9H1A4 1944 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 APCP25054 2843 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 GAS7O60861 476 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 DDAH1O94760 285 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 CKMP06732 381 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 PDE6CP51160 858 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 NPEPPSP55786 919 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 DCAF4L1Q3SXM0 396 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 SRBD1Q8N5C6 995 aaKnown RBP6.55□□□□□ -1.36
CCDC178-209ENST00000579947 CTCFLQ8NI51 663 aaPredicted RBP6.55□□□□□ -1.36
CCDC178-209ENST00000579947 PDCD6IPQ8WUM4 868 aaKnown RBP6.55□□□□□ -1.36
CCDC178-209ENST00000579947 FAM227BQ96M60 508 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 MTRQ99707 1265 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 SENP2Q9HC62 589 aa6.55□□□□□ -1.36
CCDC178-209ENST00000579947 UXTQ9UBK9 157 aaPredicted RBP6.55□□□□□ -1.36
CCDC178-209ENST00000579947 PMS2P1A4D2B8 440 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 HOXC11O43248 304 aaPredicted RBP6.54□□□□□ -1.36
CCDC178-209ENST00000579947 SIGLEC6O43699 453 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 NOL4O94818 638 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 HAPLN1P10915 354 aaPredicted RBP6.54□□□□□ -1.36
CCDC178-209ENST00000579947 CKMT1AP12532 417 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 SLC5A2P31639 672 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 DAB2P98082 770 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 GAD2Q05329 585 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 TGIF1Q15583 401 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 FUT11Q495W5 492 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 ZC2HC1CQ53FD0 456 aaPredicted RBP6.54□□□□□ -1.36
CCDC178-209ENST00000579947 PRR16Q569H4 304 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 ALKAL1Q6UXT8 129 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 HEATR3Q7Z4Q2 680 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 ASAP3Q8TDY4 903 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 TRMT2BQ96GJ1 504 aaKnown RBP6.54□□□□□ -1.36
CCDC178-209ENST00000579947 CEP170P1Q96L14 293 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 USP29Q9HBJ7 922 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 PRDM8Q9NQV8 689 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 GDF3Q9NR23 364 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 ERRFI1Q9UJM3 462 aaPredicted RBP6.54□□□□□ -1.36
CCDC178-209ENST00000579947 GDAQ9Y2T3 454 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 PCDHB6Q9Y5E3 794 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 TRIP11Q15643 1979 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 HIVEP3Q5T1R4 2406 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 ARHGEF17Q96PE2 2063 aaPredicted RBP6.54□□□□□ -1.36
CCDC178-209ENST00000579947 CCDC187A0A096LP49 1063 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 LEFTY2O00292 366 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 MSH4O15457 936 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 C7P10643 843 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 CD1EP15812 388 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 HDAC4P56524 1084 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 ATP2C1P98194 919 aaPredicted RBP6.54□□□□□ -1.36
CCDC178-209ENST00000579947 BNIP3Q12983 259 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 MGAT5BQ3V5L5 792 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 NOSTRINQ8IVI9 506 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 BIRC7Q96CA5 298 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 CYP2S1Q96SQ9 504 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 TMUB1Q9BVT8 246 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 TRPC7Q9HCX4 862 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 DEC1Q9P2X7 70 aa6.54□□□□□ -1.36
CCDC178-209ENST00000579947 A0A1B0GVM2 712 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 TRIM38O00635 465 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 DKC1O60832 514 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCDC178-209ENST00000579947 PLEKHA8P1O95397 391 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 WNT1P04628 370 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 CSH1P0DML2 217 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 CSH2P0DML3 217 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 CALM1P0DP23 149 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 CALM2P0DP24 149 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 CALM3P0DP25 149 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 TYMPP19971 482 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 QARSP47897 775 aaKnown RBP6.53□□□□□ -1.36
CCDC178-209ENST00000579947 MFAP1P55081 439 aaKnown RBP6.53□□□□□ -1.36
CCDC178-209ENST00000579947 PRAMEF14Q5SWL7 426 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 LRCH2Q5VUJ6 765 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 WWC2Q6AWC2 1192 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 LRRC15Q8TF66 581 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 PRCCQ92733 491 aaPredicted RBP6.53□□□□□ -1.36
CCDC178-209ENST00000579947 CATSPER2Q96P56 530 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 ADPGKQ9BRR6 497 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 BMP2KQ9NSY1 1161 aaPredicted RBP6.53□□□□□ -1.36
CCDC178-209ENST00000579947 PPM1HQ9ULR3 514 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 CRYBG3Q68DQ2 2970 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 WIPF1O43516 503 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 TULP3O75386 442 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 PSMD10O75832 226 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 KCNE1P15382 129 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 PTGER4P35408 488 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 ARL2P36404 184 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 AARSP49588 968 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCDC178-209ENST00000579947 BCAT1P54687 386 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 STARD3Q14849 445 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 VASH2Q86V25 355 aa6.53□□□□□ -1.36
CCDC178-209ENST00000579947 ARL14EPQ8N8R7 260 aaPredicted RBP6.53□□□□□ -1.36
CCDC178-209ENST00000579947 TTC16Q8NEE8 873 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms