RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 TRMT2BQ96GJ1 504 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 VCPIP1Q96JH7 1222 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 EPHX3Q9H6B9 360 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CNGB3Q9NQW8 809 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ARHGAP20Q9P2F6 1191 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 WDR35Q9P2L0 1181 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ADAMTS1Q9UHI8 967 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ZMYM5Q9UJ78 669 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 NOTCH4Q99466 2003 aa11.87□□□□□ -0.51
CDK5RAP3-210ENST00000578733 LINC01565O15544 149 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GLP2RO95838 553 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MYBL1P10243 752 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 UNGP13051 313 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 LCP1P13796 627 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 DESP17661 470 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MTHFRP42898 656 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 KCNQ1P51787 676 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TKTL1P51854 596 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 KIF11P52732 1056 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CACNA2D1P54289 1103 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 C1QBPQ07021 282 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ADIGQ0VDE8 80 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SPA17Q15506 151 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CTC1Q2NKJ3 1217 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ARHGAP15Q53QZ3 475 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 RAB41Q5JT25 222 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ATAT1Q5SQI0 421 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CCDC122Q5T0U0 273 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SDHAF4Q5VUM1 108 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PMF1Q6P1K2 205 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ALKBH5Q6P6C2 394 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TMC5Q6UXY8 1006 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 DNAJB7Q7Z6W7 309 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TADA2BQ86TJ2 420 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SCML4Q8N228 414 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 STKLD1Q8NE28 680 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ZMIZ2Q8NF64 920 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CPA5Q8WXQ8 436 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 IRGQQ8WZA9 623 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 FBXO32Q969P5 355 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 C18orf8Q96DM3 657 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MYRFLQ96LU7 910 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 NECTIN4Q96NY8 510 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CDK5RAP1Q96SZ6 601 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CORO1BQ9BR76 489 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TTLL2Q9BWV7 592 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SLC4A5Q9BY07 1137 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TLR8Q9NR97 1041 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TRPM5Q9NZQ8 1165 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ADAM22Q9P0K1 906 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 FAM50BQ9Y247 325 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CLUHO75153 1309 aa11.86□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ANKRD62A6NC57 917 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TMCO5BA8MYB1 307 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 HHLA1C9JL84 531 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TNFRSF10BO14763 440 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PAPLNO95428 1278 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ZBED1O96006 694 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PLEKP08567 350 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CFHP08603 1231 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GABRB2P47870 512 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 RPL34P49207 117 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 COL19A1Q14993 1142 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 OR6B2Q6IFH4 312 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GPR149Q86SP6 731 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TMEM110Q86TL2 294 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PHF13Q86YI8 300 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 LRRC8AQ8IWT6 810 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SLC30A5Q8TAD4 765 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GPR152Q8TDT2 470 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MRPS31Q92665 395 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 HLA-CQ95604 372 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PCDHB18PQ96TA0 734 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CHP1Q99653 195 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 C11orf70Q9BRQ4 267 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SYT11Q9BT88 431 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ADAM7Q9H2U9 754 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 UBE2ZQ9H832 354 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 AVENQ9NQS1 362 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TMEM30AQ9NV96 361 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CD207Q9UJ71 328 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 NAGPAQ9UK23 515 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SCML2Q9UQR0 700 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 USP3Q9Y6I4 520 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SCINQ9Y6U3 715 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 NCANO14594 1321 aa11.85□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PIEZO1Q92508 2521 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 A0A087X0T9 212 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SOBPA7XYQ1 873 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 EIF3CLB5ME19 914 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 E5RJQ4 531 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TULP2O00295 520 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 DDX3XO00571 662 aaKnown RBP eCLIP11.84□□□□□ -0.511e-8■■■□□ 15.4
CDK5RAP3-210ENST00000578733 ARHGAP6O43182 974 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TBX10O75333 385 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 RHOP08100 348 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 USP17L7P0C7H9 530 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 FAM228BP0C875 321 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 RALAP11233 206 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MYL4P12829 197 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms