RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 ITFG1Q8TB96 612 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 SHKBP1Q8TBC3 707 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 GPR152Q8TDT2 470 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 BAP1Q92560 729 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 FBXO32Q969P5 355 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 MRFAP1L1Q96HT8 127 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 RPGRIP1Q96KN7 1286 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 ZSWIM1Q9BR11 485 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 SLC4A5Q9BY07 1137 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 TRIM5Q9C035 493 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 PDCL3Q9H2J4 239 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 KIF9Q9HAQ2 790 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 ZNF334Q9HCZ1 680 aaPredicted RBP13.04□□□□□ -0.32
RARA-208ENST00000577646 CLIC5Q9NZA1 410 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 AJAP1Q9UKB5 411 aaPredicted RBP13.04□□□□□ -0.32
RARA-208ENST00000577646 DENND4AQ7Z401 1863 aa13.04□□□□□ -0.32
RARA-208ENST00000577646 A0A1W2PRU2 124 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 ZNF840PA6NDX5 716 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 ANHXE9PGG2 379 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 ECI2O75521 394 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 GFPT2O94808 682 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 ZBED1O96006 694 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 CCR2P41597 374 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 PRKCIP41743 596 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 TKTL1P51854 596 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 MTMR3Q13615 1198 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 SLC5A9Q2M3M2 681 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 SFMBT2Q5VUG0 894 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 SDHAF4Q5VUM1 108 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 KLHDC10Q6PID8 442 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 BEND5Q7L4P6 421 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 GET4Q7L5D6 327 aaPredicted RBP13.03□□□□□ -0.32
RARA-208ENST00000577646 IRF2BP2Q7Z5L9 587 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 TMEM150AQ86TG1 271 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 GAS2L3Q86XJ1 694 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 ZDHHC17Q8IUH5 632 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 VSTM4Q8IW00 320 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 SIX6OS1Q8N1H7 587 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 UBA3Q8TBC4 463 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 EPS8L1Q8TE68 723 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 DDX1Q92499 740 aaKnown RBP13.03□□□□□ -0.32
RARA-208ENST00000577646 SMARCD2Q92925 531 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 SECISBP2LQ93073 1101 aaKnown RBP13.03□□□□□ -0.32
RARA-208ENST00000577646 MYADMQ96S97 322 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 C2orf16Q68DN1 1984 aa13.03□□□□□ -0.32
RARA-208ENST00000577646 TRAV19A0A0A6YYK7 116 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 GLI1P08151 1106 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 USP17L7P0C7H9 530 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 RALAP11233 206 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 TCF3P15923 654 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 CEBPBP17676 345 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 AVPR1AP37288 418 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 USP46P62068 366 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 TEAD2Q15562 447 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 TSR1Q2NL82 804 aaKnown RBP13.02□□□□□ -0.33
RARA-208ENST00000577646 HECTD3Q5T447 861 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 GPR158Q5T848 1215 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 PMF1Q6P1K2 205 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 DDX42Q86XP3 938 aaKnown RBP eCLIP13.02□□□□□ -0.33
RARA-208ENST00000577646 RNF135Q8IUD6 432 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 CMTM8Q8IZV2 173 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 C1orf131Q8NDD1 294 aaKnown RBP13.02□□□□□ -0.33
RARA-208ENST00000577646 SCAMP5Q8TAC9 235 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 GOLGA1Q92805 767 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.33
RARA-208ENST00000577646 ELSPBP1Q96BH3 223 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 TCEAL4Q96EI5 215 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 ASB16Q96NS5 453 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 LRFN3Q9BTN0 628 aa13.02□□□□□ -0.33
RARA-208ENST00000577646 NOCTQ9UK39 431 aaKnown RBP13.02□□□□□ -0.33
RARA-208ENST00000577646 NOTCH4Q99466 2003 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 LRRC53A6NM62 1247 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 C2CD4DB7Z1M9 353 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 GPR37L1O60883 481 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 OLFM2O95897 454 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 HDCP19113 662 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 HNRNPH3P31942 346 aaKnown RBP13.01□□□□□ -0.33
RARA-208ENST00000577646 SCNN1AP37088 669 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 CDR1P51861 262 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 SLC7A9P82251 487 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 PLCB2Q00722 1185 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 ARID5BQ14865 1188 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 ASIC2Q16515 512 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 DENND1BQ6P3S1 775 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 NOP9Q86U38 636 aaKnown RBP13.01□□□□□ -0.33
RARA-208ENST00000577646 VPS36Q86VN1 386 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 CELF5Q8N6W0 485 aaKnown RBP13.01□□□□□ -0.33
RARA-208ENST00000577646 OR8K1Q8NGG5 319 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 DEPDC1BQ8WUY9 529 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 MCRS1Q96EZ8 462 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 PPP1R13BQ96KQ4 1090 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 AGPAT1Q99943 283 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 SLC46A2Q9BY10 475 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 SLITRK6Q9H5Y7 841 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 ZFP14Q9HCL3 533 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 ABCC13Q9NSE7 274 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 OLA1Q9NTK5 396 aaKnown RBP13.01□□□□□ -0.33
RARA-208ENST00000577646 ASNSD1Q9NWL6 643 aa13.01□□□□□ -0.33
RARA-208ENST00000577646 CHORDC1Q9UHD1 332 aaPredicted RBP13.01□□□□□ -0.33
RARA-208ENST00000577646 CDH22Q9UJ99 828 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms