RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 LRRC4Q9HBW1 653 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 WDR6Q9NNW5 1121 aaKnown RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 ASAH2Q9NR71 780 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 ABHD10Q9NUJ1 306 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 SEPT11Q9NVA2 429 aaKnown RBP9.03□□□□□ -0.96
NUP88-211ENST00000575976 COMMD8Q9NX08 183 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 IL37Q9NZH6 218 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 TJP2Q9UDY2 1190 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 CEP83Q9Y592 693 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 USP3Q9Y6I4 520 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 TRANK1O15050 2925 aa9.03□□□□□ -0.96
NUP88-211ENST00000575976 A0A1W2PRU2 124 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 FAM92AA1XBS5 289 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 PI4K2BG5E9Z4 385 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 DDX3XO00571 662 aaKnown RBP eCLIP9.02□□□□□ -0.97
NUP88-211ENST00000575976 TADA3O75528 432 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 PLEKP08567 350 aaPredicted RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 USP17L7P0C7H9 530 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 UNGP13051 313 aaPredicted RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 FSHRP23945 695 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 RPL34P49207 117 aaKnown RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 KCNQ1P51787 676 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 TKTL1P51854 596 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 CYP4F8P98187 520 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 ADIGQ0VDE8 80 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 PDCLQ13371 301 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 CBX2Q14781 532 aaPredicted RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 SLC5A9Q2M3M2 681 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 TSR1Q2NL82 804 aaKnown RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 PTPN20Q4JDL3 420 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 TDRD12Q587J7 1177 aaKnown RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 PRSS36Q5K4E3 855 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 NAA35Q5VZE5 725 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 TRIM72Q6ZMU5 477 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 GAREM2Q75VX8 874 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 TMEM150AQ86TG1 271 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 LEMD2Q8NC56 503 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 ITFG1Q8TB96 612 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 CPA5Q8WXQ8 436 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 NDRG1Q92597 394 aaKnown RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 FBXO32Q969P5 355 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 PPP1R13BQ96KQ4 1090 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 CPXM1Q96SM3 734 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 CHP1Q99653 195 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 SLC4A5Q9BY07 1137 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 ULBP1Q9BZM6 244 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 MIS12Q9H081 205 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 ATXN3LQ9H3M9 355 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 FBXO44Q9H4M3 255 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 AVENQ9NQS1 362 aaPredicted RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 ST7Q9NRC1 585 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 EHD2Q9NZN4 543 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 ARHGAP20Q9P2F6 1191 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 UXTQ9UBK9 157 aaPredicted RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 CHORDC1Q9UHD1 332 aaPredicted RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 MRPS23Q9Y3D9 190 aaKnown RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 BZW2Q9Y6E2 419 aaKnown RBP9.02□□□□□ -0.97
NUP88-211ENST00000575976 CLUHO75153 1309 aa9.02□□□□□ -0.97
NUP88-211ENST00000575976 E5RJQ4 531 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 ZNF197O14709 1029 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 LSM8O95777 96 aaKnown RBP9.01□□□□□ -0.97
NUP88-211ENST00000575976 ZBED1O96006 694 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 ERBB2P04626 1255 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 IL9P15248 144 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 CEBPBP17676 345 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 CDC25CP30307 473 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 EIF4A3P38919 411 aaKnown RBP9.01□□□□□ -0.97
NUP88-211ENST00000575976 ACADSBP45954 432 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 PGFP49763 221 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 TEAD2Q15562 447 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 CLEC16AQ2KHT3 1053 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 PM20D1Q6GTS8 502 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 PTCRAQ6ISU1 281 aaPredicted RBP9.01□□□□□ -0.97
NUP88-211ENST00000575976 GET4Q7L5D6 327 aaPredicted RBP9.01□□□□□ -0.97
NUP88-211ENST00000575976 BHLHA9Q7RTU4 235 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 SCD5Q86SK9 330 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 TMEM110Q86TL2 294 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 ERICH1Q86X53 443 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 SCUBE3Q8IX30 993 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 SIX6OS1Q8N1H7 587 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 SLC30A5Q8TAD4 765 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 SHKBP1Q8TBC3 707 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 CLEC4CQ8WTT0 213 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 ING5Q8WYH8 240 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 NECTIN4Q96NY8 510 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 NOX5Q96PH1 765 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 SLITRK1Q96PX8 696 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 NMUR1Q9HB89 426 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 CYLDQ9NQC7 956 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 CNGB3Q9NQW8 809 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 ZNHIT6Q9NWK9 470 aaKnown RBP9.01□□□□□ -0.97
NUP88-211ENST00000575976 TAS2R14Q9NYV8 317 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 GMIPQ9P107 970 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 IMPACTQ9P2X3 320 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 SCML2Q9UQR0 700 aa9.01□□□□□ -0.97
NUP88-211ENST00000575976 A0A1W2PQH9 124 aa9□□□□□ -0.97
NUP88-211ENST00000575976 ZNF840PA6NDX5 716 aa9□□□□□ -0.97
NUP88-211ENST00000575976 TMCO5BA8MYB1 307 aa9□□□□□ -0.97
NUP88-211ENST00000575976 PAPSS1O43252 624 aaPredicted RBP9□□□□□ -0.97
NUP88-211ENST00000575976 FGF19O95750 216 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms