RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 GRAMD4Q6IC98 578 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 RHBDF2Q6PJF5 856 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 DENND5BQ6ZUT9 1274 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 ETFBKMTQ8IXQ9 262 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 TMEM86AQ8N2M4 240 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 PHTF2Q8N3S3 785 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 SCFD1Q8WVM8 642 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 FGF11Q92914 225 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 TOE1Q96GM8 510 aaKnown RBP6.3□□□□□ -1.4
SMG6-219ENST00000575663 TMEM176AQ96HP8 235 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 MRGPRX1Q96LB2 322 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 LGMNQ99538 433 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 GABRG3Q99928 467 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 LARP6Q9BRS8 491 aaKnown RBP6.3□□□□□ -1.4
SMG6-219ENST00000575663 NTPCRQ9BSD7 190 aaKnown RBP6.3□□□□□ -1.4
SMG6-219ENST00000575663 MSTO1Q9BUK6 570 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 GPR174Q9BXC1 333 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 NRSN2Q9GZP1 204 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 ASB7Q9H672 318 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 ZSWIM6Q9HCJ5 1215 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 SMPD4Q9NXE4 827 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 DDX43Q9NXZ2 648 aaKnown RBP6.3□□□□□ -1.4
SMG6-219ENST00000575663 CFAP97Q9P2B7 532 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 BTBD3Q9Y2F9 522 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 SH3BP1Q9Y3L3 701 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 STARD13Q9Y3M8 1113 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 PCDHGA1Q9Y5H4 931 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 PCNX2A6NKB5 2137 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 PLXND1Q9Y4D7 1925 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 E2F8A0AVK6 867 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 SFI1A8K8P3 1242 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 E9PMD0 336 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 K7ENM7 598 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 LAD1O00515 517 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 SCAMP3O14828 347 aaKnown RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 TRIM66O15016 1216 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 FAM189A1O60320 539 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 PCDHGA12O60330 932 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 TULP3O75386 442 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 OLFM2O95897 454 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 ABL1P00519 1130 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 PIGRP01833 764 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 MBL2P11226 248 aaPredicted RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 ACADMP11310 421 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 ACAT1P24752 427 aaKnown RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 CDC25AP30304 524 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 OXTRP30559 389 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 ABCD1P33897 745 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 MAGEA11P43364 429 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 CSRP3P50461 194 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 ZXDBP98169 803 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 SRSF1Q07955 248 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMG6-219ENST00000575663 CCDC173Q0VFZ6 552 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 RTP5Q14D33 572 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 MAPRE1Q15691 268 aaKnown RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 ECM1Q16610 540 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 ANO4Q32M45 955 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 KRT79Q5XKE5 535 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 RINT1Q6NUQ1 792 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 PCSK4Q6UW60 755 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 VSTM1Q6UX27 236 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 C1orf186Q6ZWK4 172 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 PRICKLE2Q7Z3G6 844 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 METTL3Q86U44 580 aaKnown RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 NT5DC4Q86YG4 428 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 SPACA3Q8IXA5 215 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 ADGRF2Q8IZF7 708 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 PDCL2Q8N4E4 241 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 NAT16Q8N8M0 369 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 ZNF248Q8NDW4 579 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 LRRC15Q8TF66 581 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 SNX19Q92543 992 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 IGSF8Q969P0 613 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 SPATA17Q96L03 361 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 SLITRK1Q96PX8 696 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 XPO6Q96QU8 1125 aaKnown RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 RUSC1Q9BVN2 902 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 HAPLN2Q9GZV7 340 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 PCED1AQ9H1Q7 454 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 CD93Q9NPY3 652 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 PDRG1Q9NUG6 133 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 DNAJC17Q9NVM6 304 aaKnown RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 DPP3Q9NY33 737 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 WSB2Q9NYS7 404 aaPredicted RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 KCND2Q9NZV8 630 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 USP36Q9P275 1121 aaKnown RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 EIF2B4Q9UI10 523 aaKnown RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 DACH1Q9UI36 760 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 CPSF3Q9UKF6 684 aaKnown RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 GTF3C4Q9UKN8 822 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 HEMK1Q9Y5R4 338 aaPredicted RBP6.29□□□□□ -1.4
SMG6-219ENST00000575663 ZNF462Q96JM2 2506 aa6.29□□□□□ -1.4
SMG6-219ENST00000575663 MYO16Q9Y6X6 1858 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 URB1O60287 2271 aaKnown RBP6.28□□□□□ -1.4
SMG6-219ENST00000575663 A0A0B4J269 797 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 A0A1B0GVT2 93 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 ZNF840PA6NDX5 716 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 METTL12A8MUP2 240 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 PYCARD-AS1I3L0S3 204 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 ENC1O14682 589 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms