RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 XYLT2Q9H1B5 865 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 SMYD3Q9H7B4 428 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 VRTNQ9H8Y1 702 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 DMAP1Q9NPF5 467 aaPredicted RBP11.1□□□□□ -0.63
TVP23B-208ENST00000575261 ARHGEF4Q9NR80 690 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 TBC1D14Q9P2M4 693 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 INVSQ9Y283 1065 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 THADAQ6YHU6 1953 aa11.1□□□□□ -0.63
TVP23B-208ENST00000575261 SPEGQ15772 3267 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 E2F8A0AVK6 867 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 C4orf47A7E2U8 309 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 CLDN5O00501 218 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 KHNYNO15037 678 aaKnown RBP11.09□□□□□ -0.63
TVP23B-208ENST00000575261 POLR2DO15514 142 aaKnown RBP11.09□□□□□ -0.63
TVP23B-208ENST00000575261 KAT7O95251 611 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 BCKDHBP21953 392 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 GRIA2P42262 883 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 TUBP50607 506 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 AP3M2P53677 418 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 SLC5A3P53794 718 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 KDSRQ06136 332 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 BIRC3Q13489 604 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 KNOP1Q1ED39 458 aaKnown RBP11.09□□□□□ -0.63
TVP23B-208ENST00000575261 ZNF699Q32M78 642 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 EOGTQ5NDL2 527 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 HECTD3Q5T447 861 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 TMEM92Q6UXU6 159 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 SCARA5Q6ZMJ2 495 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 FAM35AQ86V20 835 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 C12orf40Q86WS4 652 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 ALLCQ8N6M5 410 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 IL17RCQ8NAC3 791 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 TXNDC5Q8NBS9 432 aaKnown RBP11.09□□□□□ -0.63
TVP23B-208ENST00000575261 OTUB2Q96DC9 234 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 SMARCD1Q96GM5 515 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 TNIP3Q96KP6 325 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 MED10Q9BTT4 135 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 GZF1Q9H116 711 aaPredicted RBP11.09□□□□□ -0.63
TVP23B-208ENST00000575261 POLMQ9NP87 494 aaPredicted RBP11.09□□□□□ -0.63
TVP23B-208ENST00000575261 SLC39A2Q9NP94 309 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 TMEM9BQ9NQ34 198 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 TFIP11Q9UBB9 837 aaKnown RBP11.09□□□□□ -0.63
TVP23B-208ENST00000575261 ABCA7Q8IZY2 2146 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 PLXND1Q9Y4D7 1925 aa11.09□□□□□ -0.63
TVP23B-208ENST00000575261 PVALEFA0A1B0GWK0 134 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 ANTXRLA6NF34 631 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 SGK1O00141 431 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 COCHO43405 550 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 KLF8O95600 359 aaPredicted RBP11.08□□□□□ -0.64
TVP23B-208ENST00000575261 CHRM1P11229 460 aaPredicted RBP11.08□□□□□ -0.64
TVP23B-208ENST00000575261 CASP1P29466 404 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 TIE1P35590 1138 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 SLC6A11P48066 632 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 DHPSP49366 369 aaPredicted RBP11.08□□□□□ -0.64
TVP23B-208ENST00000575261 CASP4P49662 377 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 NOVA1P51513 510 aaKnown RBP11.08□□□□□ -0.64
TVP23B-208ENST00000575261 GAD2Q05329 585 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 MESP2Q0VG99 397 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 NCOA4Q13772 614 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 PREPLQ4J6C6 727 aaPredicted RBP11.08□□□□□ -0.64
TVP23B-208ENST00000575261 ZNF667Q5HYK9 610 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 LY6G5CQ5SRR4 150 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 SNX30Q5VWJ9 437 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 BTBD8Q5XKL5 378 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 RHBDF2Q6PJF5 856 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 LPCAT2Q7L5N7 544 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 TRMT11Q7Z4G4 463 aaKnown RBP11.08□□□□□ -0.64
TVP23B-208ENST00000575261 SFTPA1Q8IWL2 248 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 OLIG1Q8TAK6 271 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 ZNF516Q92618 1163 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 ZFRQ96KR1 1074 aaKnown RBP11.08□□□□□ -0.64
TVP23B-208ENST00000575261 KCNK16Q96T55 309 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 DUSP9Q99956 384 aaKnown RBP11.08□□□□□ -0.64
TVP23B-208ENST00000575261 BLZF1Q9H2G9 400 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 KRT82Q9NSB4 513 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 FAM13BQ9NYF5 915 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 BCCIPQ9P287 314 aaKnown RBP eCLIP11.08□□□□□ -0.64
TVP23B-208ENST00000575261 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
TVP23B-208ENST00000575261 SH3BP1Q9Y3L3 701 aa11.08□□□□□ -0.64
TVP23B-208ENST00000575261 TNRC6BQ9UPQ9 1833 aaKnown RBP11.07□□□□□ -0.64
TVP23B-208ENST00000575261 MYOFQ9NZM1 2061 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 A0A0A0MRY4 1105 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 LRRIQ3A6PVS8 624 aaPredicted RBP11.07□□□□□ -0.64
TVP23B-208ENST00000575261 HOXC11O43248 304 aaPredicted RBP11.07□□□□□ -0.64
TVP23B-208ENST00000575261 AP1G2O75843 785 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 P4HA1P13674 534 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 HNRNPLP14866 589 aaKnown RBP eCLIP11.07□□□□□ -0.64
TVP23B-208ENST00000575261 P2RY2P41231 377 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 TNFRSF4P43489 277 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 KIR2DL1P43626 348 aaPredicted RBP11.07□□□□□ -0.64
TVP23B-208ENST00000575261 AFMP43652 599 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 ME1P48163 572 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 CDH8P55286 799 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 ZNF252P-AS1Q0IIN9 211 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 LMAN2Q12907 356 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 CUL4BQ13620 913 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 NUDT18Q6ZVK8 323 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 CEP57L1Q8IYX8 460 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 PHTF2Q8N3S3 785 aa11.07□□□□□ -0.64
TVP23B-208ENST00000575261 SCAMP5Q8TAC9 235 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms