RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SYT10Q6XYQ8 523 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 EMC1Q8N766 993 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 LRRC57Q8N9N7 239 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 TRIM58Q8NG06 486 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 PRO3102Q9H379 93 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 CYP4F11Q9HBI6 524 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 TMEM191CA6NGB0 347 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 FSCN2O14926 492 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 FANCGO15287 622 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 USP17L7P0C7H9 530 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 RFC1P35251 1148 aaPredicted RBP25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 MESDQ14696 234 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 PTPROQ16827 1216 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 DAAM2Q86T65 1068 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 EMILIN2Q9BXX0 1053 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 DNAI1Q9UI46 699 aa25.26■■□□□ 1.63
ATPAF1-213ENST00000574428 ADH1AP07327 375 aa25.25■■□□□ 1.63
ATPAF1-213ENST00000574428 SPATA31D3P0C874 917 aa25.25■■□□□ 1.63
ATPAF1-213ENST00000574428 MRPS5P82675 430 aaKnown RBP25.25■■□□□ 1.63
ATPAF1-213ENST00000574428 SPATA31D4Q6ZUB0 917 aa25.25■■□□□ 1.63
ATPAF1-213ENST00000574428 NGRNQ9NPE2 291 aaKnown RBP25.25■■□□□ 1.63
ATPAF1-213ENST00000574428 CNGB3Q9NQW8 809 aa25.25■■□□□ 1.63
ATPAF1-213ENST00000574428 FBXO21O94952 628 aa25.24■■□□□ 1.63
ATPAF1-213ENST00000574428 ZBED1O96006 694 aa25.24■■□□□ 1.63
ATPAF1-213ENST00000574428 ATF6P18850 670 aa25.24■■□□□ 1.63
ATPAF1-213ENST00000574428 TERF1P54274 439 aa25.24■■□□□ 1.63
ATPAF1-213ENST00000574428 RPL10AP62906 217 aaKnown RBP25.24■■□□□ 1.63
ATPAF1-213ENST00000574428 GDPD5Q8WTR4 605 aa25.24■■□□□ 1.63
ATPAF1-213ENST00000574428 KHSRPQ92945 711 aaKnown RBP eCLIP25.24■■□□□ 1.63
ATPAF1-213ENST00000574428 TMEM59LQ9UK28 342 aa25.24■■□□□ 1.63
ATPAF1-213ENST00000574428 HYOU1Q9Y4L1 999 aa25.24■■□□□ 1.63
ATPAF1-213ENST00000574428 EPOPA6NHQ4 379 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 PRRG1O14668 218 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 TGM5O43548 720 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 FTCDO95954 541 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 KLRC2P26717 231 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 TUFMP49411 452 aaKnown RBP25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 DAOAP59103 153 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 OGDHQ02218 1023 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 SLC26A9Q7LBE3 791 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 CPNE8Q86YQ8 564 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 NUP93Q8N1F7 819 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 GIPC2Q8TF65 315 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 TIFAQ96CG3 184 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 CALR3Q96L12 384 aaKnown RBP25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 KIF2AO00139 706 aaPredicted RBP25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 MYO1FO00160 1098 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 LPXNO60711 386 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 USP46P62068 366 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 ZNF252P-AS1Q0IIN9 211 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 TRNP1Q6NT89 227 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 C11orf63Q6NUN7 778 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 ZNF592Q92610 1267 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 SPATA17Q96L03 361 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 HSFX1Q9UBD0 423 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 YIPF1Q9Y548 306 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 USP3Q9Y6I4 520 aa25.23■■□□□ 1.63
ATPAF1-213ENST00000574428 YJEFN3A6XGL0 299 aa25.22■■□□□ 1.63
ATPAF1-213ENST00000574428 E7ENQ6 273 aa25.22■■□□□ 1.63
ATPAF1-213ENST00000574428 ELF1P32519 619 aa25.22■■□□□ 1.63
ATPAF1-213ENST00000574428 FLT3P36888 993 aa25.22■■□□□ 1.63
ATPAF1-213ENST00000574428 SCNN1AP37088 669 aa25.22■■□□□ 1.63
ATPAF1-213ENST00000574428 MTMR3Q13615 1198 aa25.22■■□□□ 1.63
ATPAF1-213ENST00000574428 EFHC1Q5JVL4 640 aa25.22■■□□□ 1.63
ATPAF1-213ENST00000574428 HFE2Q6ZVN8 426 aa25.22■■□□□ 1.63
ATPAF1-213ENST00000574428 BHLHA9Q7RTU4 235 aa25.22■■□□□ 1.63
ATPAF1-213ENST00000574428 FAM149B1Q96BN6 582 aa25.22■■□□□ 1.63
ATPAF1-213ENST00000574428 PLXNA3P51805 1871 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 SMAD3P84022 425 aaKnown RBP25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 MLLT1Q03111 559 aaPredicted RBP25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 PM20D1Q6GTS8 502 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 DENND5BQ6ZUT9 1274 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 SLFN11Q7Z7L1 901 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 TCEAL8Q8IYN2 117 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 ENC1O14682 589 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 DAB2IPQ5VWQ8 1189 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 LILRA6Q6PI73 481 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 SYCE1Q8N0S2 351 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 IP6K2Q9UHH9 426 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 INSL5Q9Y5Q6 135 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 ALG6Q9Y672 507 aa25.21■■□□□ 1.63
ATPAF1-213ENST00000574428 C2CD4BA6NLJ0 364 aa25.2■■□□□ 1.62
ATPAF1-213ENST00000574428 SLC38A8A6NNN8 435 aa25.2■■□□□ 1.62
ATPAF1-213ENST00000574428 SART1O43290 800 aaKnown RBP25.2■■□□□ 1.62
ATPAF1-213ENST00000574428 NCK2O43639 380 aa25.2■■□□□ 1.62
ATPAF1-213ENST00000574428 HSF2BPO75031 334 aa25.2■■□□□ 1.62
ATPAF1-213ENST00000574428 PROSCO94903 275 aa25.2■■□□□ 1.62
ATPAF1-213ENST00000574428 YWHAZP63104 245 aaKnown RBP25.2■■□□□ 1.62
ATPAF1-213ENST00000574428 RXFP2Q8WXD0 754 aa25.2■■□□□ 1.62
ATPAF1-213ENST00000574428 MAFFQ9ULX9 164 aa25.2■■□□□ 1.62
ATPAF1-213ENST00000574428 PACSIN2Q9UNF0 486 aaPredicted RBP25.2■■□□□ 1.62
ATPAF1-213ENST00000574428 GLUD1P00367 558 aa25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 PDGFRAP16234 1089 aa25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 GPD1P21695 349 aa25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 COMTP21964 271 aa25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 PSMA2P25787 234 aa25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 CASQ1P31415 396 aa25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 ALDH1A3P47895 512 aa25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 PDE12Q6L8Q7 609 aaKnown RBP25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 SLC7A14Q8TBB6 771 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms