RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 CSNK1G1Q9HCP0 422 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 SEMA4GQ9NTN9 838 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 GMIPQ9P107 970 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 RAB23Q9ULC3 237 aa19.22■□□□□ 0.67
CHD3-214ENST00000572579 CCDC163A0A0D9SF12 145 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 HHLA1C9JL84 531 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 MAPK13O15264 365 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 GDF9O60383 454 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 GREM1O60565 184 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 ATG13O75143 517 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 AP1G2O75843 785 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 HNRNPLP14866 589 aaKnown RBP eCLIP19.21■□□□□ 0.67
CHD3-214ENST00000572579 FBXO43Q4G163 708 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 SYT13Q7L8C5 426 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 GPRIN1Q7Z2K8 1008 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 USP33Q8TEY7 942 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 GAB3Q8WWW8 586 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 EEF2KMTQ96G04 330 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 SLITRK1Q96PX8 696 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 MED10Q9BTT4 135 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 KRT82Q9NSB4 513 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 OSER1Q9NX31 292 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 EHD2Q9NZN4 543 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 SLC8A2Q9UPR5 921 aa19.21■□□□□ 0.67
CHD3-214ENST00000572579 DCDC2BA2VCK2 349 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 DCLK1O15075 740 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 CALUO43852 315 aaPredicted RBP19.2■□□□□ 0.66
CHD3-214ENST00000572579 NFATC1O95644 943 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 TBX18O95935 607 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 MBL2P11226 248 aaPredicted RBP19.2■□□□□ 0.66
CHD3-214ENST00000572579 NR2F2P24468 414 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 PDE6CP51160 858 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 LMNB2Q03252 620 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 CCDC6Q16204 474 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 GUF1Q8N442 669 aaKnown RBP19.2■□□□□ 0.66
CHD3-214ENST00000572579 KIAA1958Q8N8K9 716 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 TAF4BQ92750 862 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 SEMA4DQ92854 862 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 SMARCD1Q96GM5 515 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 TNIP3Q96KP6 325 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 DMAP1Q9NPF5 467 aaPredicted RBP19.2■□□□□ 0.66
CHD3-214ENST00000572579 RXFP3Q9NSD7 469 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 FAM49BQ9NUQ9 324 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 FRMD4BQ9Y2L6 1034 aa19.2■□□□□ 0.66
CHD3-214ENST00000572579 PRR5-ARHGAP8B1AHC4 643 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 AXIN1O15169 862 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 RPP40O75818 363 aaKnown RBP19.19■□□□□ 0.66
CHD3-214ENST00000572579 RTN3O95197 1032 aaPredicted RBP19.19■□□□□ 0.66
CHD3-214ENST00000572579 SEC13P55735 322 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 MAP3K7CLP57077 242 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 ARHGAP8P85298 464 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 INCA1Q0VD86 236 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 DMC1Q14565 340 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 CSRP2Q16527 193 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 EMC10Q5UCC4 262 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 CEP68Q76N32 757 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 UNC93AQ86WB7 457 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 PHTF2Q8N3S3 785 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 CAMKK1Q8N5S9 505 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 OVCA2Q8WZ82 227 aa19.19■□□□□ 0.66
CHD3-214ENST00000572579 SCAND2PQ9GZW5 306 aaPredicted RBP19.19■□□□□ 0.66
CHD3-214ENST00000572579 ZNF638Q14966 1978 aaKnown RBP19.19■□□□□ 0.66
CHD3-214ENST00000572579 A0A0A0MRY4 1105 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 LRP3O75074 770 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 PIK3CAP42336 1068 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 NR1H3Q13133 447 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 ADAM9Q13443 819 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 C2orf27AQ580R0 203 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 HECTD3Q5T447 861 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 PRR23CQ6ZRP0 262 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.18■□□□□ 0.66
CHD3-214ENST00000572579 FAM186BQ8IYM0 893 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 P2RY11Q96G91 374 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 HNRNPABQ99729 332 aaKnown RBP19.18■□□□□ 0.66
CHD3-214ENST00000572579 ARRDC1-AS1Q9H2J1 176 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 EBF1Q9UH73 591 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 HCN2Q9UL51 889 aa19.18■□□□□ 0.66
CHD3-214ENST00000572579 E2F8A0AVK6 867 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 ADORA2BP29275 332 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 PNOCQ13519 176 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 SF3A2Q15428 464 aaKnown RBP19.17■□□□□ 0.66
CHD3-214ENST00000572579 PLK5Q496M5 336 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 LY6G5CQ5SRR4 150 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 CLEC20AQ6ZU45 233 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 INTS8Q75QN2 995 aaKnown RBP19.17■□□□□ 0.66
CHD3-214ENST00000572579 CACNA2D4Q7Z3S7 1137 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 BBS7Q8IWZ6 715 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 FMR1NBQ8N0W7 255 aaPredicted RBP19.17■□□□□ 0.66
CHD3-214ENST00000572579 CCDC33Q8N5R6 958 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 ERCC4Q92889 916 aaPredicted RBP19.17■□□□□ 0.66
CHD3-214ENST00000572579 ZC3H10Q96K80 434 aaKnown RBP19.17■□□□□ 0.66
CHD3-214ENST00000572579 DUSP15Q9H1R2 295 aaPredicted RBP19.17■□□□□ 0.66
CHD3-214ENST00000572579 SMOC1Q9H4F8 434 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 NMUR1Q9HB89 426 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 COMMD8Q9NX08 183 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 INVSQ9Y283 1065 aa19.17■□□□□ 0.66
CHD3-214ENST00000572579 LAMA1P25391 3075 aa19.16■□□□□ 0.66
CHD3-214ENST00000572579 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.16■□□□□ 0.66
CHD3-214ENST00000572579 TRIM24O15164 1050 aa19.16■□□□□ 0.66
CHD3-214ENST00000572579 CILPO75339 1184 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms