RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 WBP2Q969T9 261 aa11.85□□□□□ -0.51
NPLOC4-206ENST00000571714 SPACA7Q96KW9 195 aa11.85□□□□□ -0.51
NPLOC4-206ENST00000571714 B3GNT5Q9BYG0 378 aa11.85□□□□□ -0.51
NPLOC4-206ENST00000571714 ELOVL4Q9GZR5 314 aa11.85□□□□□ -0.51
NPLOC4-206ENST00000571714 POLMQ9NP87 494 aaPredicted RBP11.85□□□□□ -0.51
NPLOC4-206ENST00000571714 EHD2Q9NZN4 543 aa11.85□□□□□ -0.51
NPLOC4-206ENST00000571714 BCCIPQ9P287 314 aaKnown RBP eCLIP11.85□□□□□ -0.51
NPLOC4-206ENST00000571714 PILRBQ9UKJ0 227 aa11.85□□□□□ -0.51
NPLOC4-206ENST00000571714 KLK13Q9UKR3 277 aa11.85□□□□□ -0.51
NPLOC4-206ENST00000571714 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
NPLOC4-206ENST00000571714 SPAARA0A1B0GVQ0 90 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 TMEM8BA6NDV4 472 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 TRIM24O15164 1050 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 TGFB1I1O43294 461 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 COCHO43405 550 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 MBL2P11226 248 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 PTPN1P18031 435 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 GABRG2P18507 467 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 GNL1P36915 607 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 TNFRSF4P43489 277 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 CUL4AQ13619 759 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 COL9A2Q14055 689 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 SURF1Q15526 300 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 SNRNP35Q16560 246 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 SPDYCQ5MJ68 293 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 TDRD10Q5VZ19 366 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 EPM2AIP1Q7L775 607 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 MIB1Q86YT6 1006 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 OR6B3Q8NGW1 331 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 SLITRK1Q96PX8 696 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 USP28Q96RU2 1077 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 KCNK16Q96T55 309 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 NUSAP1Q9BXS6 441 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 XYLT2Q9H1B5 865 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 CD248Q9HCU0 757 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 R3HCC1Q9Y3T6 440 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 NEUROG3Q9Y4Z2 214 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 MORC2Q9Y6X9 1032 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 FAM208BQ5VWN6 2430 aa11.84□□□□□ -0.51
NPLOC4-206ENST00000571714 A0A1W2PQF6 199 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 E2F8A0AVK6 867 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 HOXC11O43248 304 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 MAP3K13O43283 966 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 TULP3O75386 442 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 DLATP10515 647 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 YWHAQP27348 245 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 PGFP49763 221 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 FAM193AP78312 1265 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 GAD2Q05329 585 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 E2F4Q16254 413 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 WDR72Q3MJ13 1102 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 SNX30Q5VWJ9 437 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 PAQR9Q6ZVX9 377 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 DDX42Q86XP3 938 aaKnown RBP eCLIP11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 BBS7Q8IWZ6 715 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 CCDC65Q8IXS2 484 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 NUP93Q8N1F7 819 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 PDILTQ8N807 584 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 NAT16Q8N8M0 369 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 TERB1Q8NA31 727 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 RDH13Q8NBN7 331 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 B3GALNT2Q8NCR0 500 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 SCAMP5Q8TAC9 235 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 ZCCHC14Q8WYQ9 949 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 CGRRF1Q99675 332 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 SNX25Q9H3E2 840 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 CCSER2Q9H7U1 834 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 CAPN10Q9HC96 672 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 AGPAT3Q9NRZ7 376 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 CALCOCO1Q9P1Z2 691 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 TBC1D14Q9P2M4 693 aa11.83□□□□□ -0.52
NPLOC4-206ENST00000571714 PKD1L2Q7Z442 2459 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 ZFYVE26Q68DK2 2539 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 FAM92AA1XBS5 289 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 A8MXQ7 604 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 UPK3BL1B0FP48 263 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 UPK3BL2E5RIL1 263 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 EIF3DO15371 548 aaKnown RBP eCLIP11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 GREM1O60565 184 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 STAU1O95793 577 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 FAM163BP0C2L3 166 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 ZDHHC11BP0C7U3 371 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 HOXD12P35452 270 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 SLC5A3P53794 718 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 MYL6P60660 151 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 SIM1P81133 766 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 RPL6Q02878 288 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 CYP24A1Q07973 514 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 PSMD6Q15008 389 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 SLC39A14Q15043 492 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 C10orf76Q5T2E6 689 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 FAM35AQ86V20 835 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 TMEM25Q86YD3 366 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 SLC41A1Q8IVJ1 513 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 PGBD3Q8N328 593 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 DEFB119Q8N690 84 aa11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 ZNF513Q8N8E2 541 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-206ENST00000571714 PDZD8Q8NEN9 1154 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms