RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 ZDHHC11BP0C7U3 371 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 CCDC130P13994 396 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 SDHBP21912 280 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 PGFP49763 221 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 NDST1P52848 882 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 PPP3CAQ08209 521 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 IFRD2Q12894 506 aaPredicted RBP12.04□□□□□ -0.48
LITAF-206ENST00000571277 NR1H3Q13133 447 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 ORC1Q13415 861 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 ZCWPW2Q504Y3 356 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 CEP135Q66GS9 1140 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 RHBDF2Q6PJF5 856 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 KRBA2Q6ZNG9 492 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 PRR23CQ6ZRP0 262 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 CEP68Q76N32 757 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 KBTBD6Q86V97 674 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 SFTPA1Q8IWL2 248 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 C12orf29Q8N999 325 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 PDZD8Q8NEN9 1154 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 USP33Q8TEY7 942 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 FBXO32Q969P5 355 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 EXOC4Q96A65 974 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 SMARCD1Q96GM5 515 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 HHIPQ96QV1 700 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 CSNK1G1Q9HCP0 422 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 KRT82Q9NSB4 513 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 CFAP97Q9P2B7 532 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 CHORDC1Q9UHD1 332 aaPredicted RBP12.04□□□□□ -0.48
LITAF-206ENST00000571277 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
LITAF-206ENST00000571277 MAPK8IP1Q9UQF2 711 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 FRMD4BQ9Y2L6 1034 aa12.04□□□□□ -0.48
LITAF-206ENST00000571277 MYH10P35580 1976 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 CALUO43852 315 aaPredicted RBP12.03□□□□□ -0.48
LITAF-206ENST00000571277 GDF9O60383 454 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 AP1G2O75843 785 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 P4HA1P13674 534 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 NR2F2P24468 414 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 TUBP50607 506 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 VAMP7P51809 220 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 INCA1Q0VD86 236 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 DMC1Q14565 340 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 DHCR24Q15392 516 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 CACNA2D4Q7Z3S7 1137 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 UNC93AQ86WB7 457 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 C12orf40Q86WS4 652 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 HOMEZQ8IX15 550 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 GUF1Q8N442 669 aaKnown RBP12.03□□□□□ -0.48
LITAF-206ENST00000571277 SLC2A14Q8TDB8 520 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 TAS1R2Q8TE23 839 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 LOXL4Q96JB6 756 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 ZC3H10Q96K80 434 aaKnown RBP12.03□□□□□ -0.48
LITAF-206ENST00000571277 TWNKQ96RR1 684 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 MED10Q9BTT4 135 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 SCAND2PQ9GZW5 306 aaPredicted RBP12.03□□□□□ -0.48
LITAF-206ENST00000571277 CCSER2Q9H7U1 834 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 APOBEC3GQ9HC16 384 aaKnown RBP12.03□□□□□ -0.48
LITAF-206ENST00000571277 COMMD8Q9NX08 183 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 GMIPQ9P107 970 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 EBF1Q9UH73 591 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 ATP8B3O60423 1300 aa12.03□□□□□ -0.48
LITAF-206ENST00000571277 CNOT1A5YKK6 2376 aaKnown RBP12.03□□□□□ -0.48
LITAF-206ENST00000571277 A0A0A0MRY4 1105 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 E2F8A0AVK6 867 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 DCDC2BA2VCK2 349 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 HHLA1C9JL84 531 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 SLC9A3R1O14745 358 aaPredicted RBP12.02□□□□□ -0.49
LITAF-206ENST00000571277 AXIN1O15169 862 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 GREM1O60565 184 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 ZNF202O95125 648 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 TRIM49P0CI25 452 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 TRIM49CP0CI26 452 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 MBL2P11226 248 aaPredicted RBP12.02□□□□□ -0.49
LITAF-206ENST00000571277 PIK3CAP42336 1068 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 SLC6A11P48066 632 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 GCLMP48507 274 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 ENPEPQ07075 957 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 HECTD3Q5T447 861 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 INTS8Q75QN2 995 aaKnown RBP12.02□□□□□ -0.49
LITAF-206ENST00000571277 GPRIN1Q7Z2K8 1008 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 DDX42Q86XP3 938 aaKnown RBP eCLIP12.02□□□□□ -0.49
LITAF-206ENST00000571277 PHTF2Q8N3S3 785 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 NETO1Q8TDF5 533 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 WHAMMQ8TF30 809 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 WBP2Q969T9 261 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 ACDQ96AP0 544 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 DUSP9Q99956 384 aaKnown RBP12.02□□□□□ -0.49
LITAF-206ENST00000571277 RTKNQ9BST9 563 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 ARRDC1-AS1Q9H2J1 176 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 GDPD2Q9HCC8 539 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.02□□□□□ -0.49
LITAF-206ENST00000571277 FAM49BQ9NUQ9 324 aa12.02□□□□□ -0.49
LITAF-206ENST00000571277 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.01□□□□□ -0.49
LITAF-206ENST00000571277 SLC30A4O14863 429 aa12.01□□□□□ -0.49
LITAF-206ENST00000571277 EPN2O95208 641 aa12.01□□□□□ -0.49
LITAF-206ENST00000571277 KIF20AO95235 890 aa12.01□□□□□ -0.49
LITAF-206ENST00000571277 APBB3O95704 486 aa12.01□□□□□ -0.49
LITAF-206ENST00000571277 CCDC192P0DO97 292 aa12.01□□□□□ -0.49
LITAF-206ENST00000571277 HNRNPLP14866 589 aaKnown RBP eCLIP12.01□□□□□ -0.49
LITAF-206ENST00000571277 EIF2DP41214 584 aaKnown RBP12.01□□□□□ -0.49
LITAF-206ENST00000571277 MAP3K7CLP57077 242 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms