RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 DNAJC18Q9H819 358 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 PRMT7Q9NVM4 692 aaPredicted RBP6.96□□□□□ -1.3
SMG1-217ENST00000569764 ARGLU1Q9NWB6 273 aaPredicted RBP6.96□□□□□ -1.3
SMG1-217ENST00000569764 CXXC1Q9P0U4 656 aaPredicted RBP6.96□□□□□ -1.3
SMG1-217ENST00000569764 PAIP2BQ9ULR5 123 aaKnown RBP6.96□□□□□ -1.3
SMG1-217ENST00000569764 PCDHA6Q9UN73 950 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 TMED5Q9Y3A6 229 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 PCDHA8Q9Y5H6 950 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 ROBO3Q96MS0 1386 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 GOLGA6L7A0A1B0GV03 622 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 LRRIQ4A6NIV6 560 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 B2RBV5 119 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 PRRG1O14668 218 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 TP73O15350 636 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 DOK2O60496 412 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 ALDH1A2O94788 518 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 EGFRP00533 1210 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 CYBAP13498 195 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 PFKFB1P16118 471 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 SMPD1P17405 629 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 MAPK10P53779 464 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 JAG1P78504 1218 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 GALEQ14376 348 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 LRRC32Q14392 662 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 SPARCL1Q14515 664 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 HLTFQ14527 1009 aaKnown RBP eCLIP6.96□□□□□ -1.3
SMG1-217ENST00000569764 STK11Q15831 433 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 MAPKAPK3Q16644 382 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 C1orf53Q5VUE5 145 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 CLEC2AQ6UVW9 174 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 ZNF600Q6ZNG1 722 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 PLEKHM3Q6ZWE6 761 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 TMTC3Q6ZXV5 915 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 ZNF557Q8N988 423 aaPredicted RBP6.96□□□□□ -1.3
SMG1-217ENST00000569764 GPKOWQ92917 476 aaPredicted RBP eCLIP6.96□□□□□ -1.3
SMG1-217ENST00000569764 PHF20Q9BVI0 1012 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 HSPBP1Q9NZL4 362 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 KIAA1257Q9ULG3 409 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 STK36Q9NRP7 1315 aa6.96□□□□□ -1.3
SMG1-217ENST00000569764 GREB1LQ9C091 1923 aaPredicted RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 FOXO6A8MYZ6 492 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 PLOD2O00469 737 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CHMP2AO43633 222 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 KRT14P02533 472 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 LTA4HP09960 611 aaKnown RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 CYP2A6P11509 494 aaPredicted RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 CES1P23141 567 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 RPL13P26373 211 aaKnown RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 TCF7P36402 384 aaPredicted RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 MRPS6P82932 125 aaKnown RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 NFE2L1Q14494 772 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CCDC85BQ15834 202 aaPredicted RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 GPAT2Q6NUI2 795 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 TMEM53Q6P2H8 277 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 GRAMD1CQ8IYS0 662 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 BEST2Q8NFU1 509 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 RASGRP4Q8TDF6 673 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CFAP57Q96MR6 1250 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 NUP88Q99567 741 aaPredicted RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 MIS12Q9H081 205 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 HSD3B7Q9H2F3 369 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 XAB2Q9HCS7 855 aaKnown RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 ATP13A1Q9HD20 1204 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 DACH1Q9UI36 760 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 DSEQ9UL01 958 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 PCDHA12Q9UN75 941 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 HPSEQ9Y251 543 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 ZFP37Q9Y6Q3 630 aaPredicted RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 MYH4Q9Y623 1939 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 EME2A4GXA9 379 aaPredicted RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 SLU7O95391 586 aaKnown RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 CASP1P29466 404 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CCT6AP40227 531 aaKnown RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 OLR1P78380 273 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 MYL7Q01449 175 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CLUL1Q15846 466 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CALCRLQ16602 461 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 NCAPH2Q6IBW4 605 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 EPM2AIP1Q7L775 607 aaPredicted RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 DHX40Q8IX18 779 aaKnown RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 TTC13Q8NBP0 860 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 NEK11Q8NG66 645 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 KIFAP3Q92845 792 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 AK8Q96MA6 479 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 NKX2-4Q9H2Z4 354 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 KCNF1Q9H3M0 494 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CYP39A1Q9NYL5 469 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 CEP350Q5VT06 3117 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 TNFRSF10AO00220 468 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 EDIL3O43854 480 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 PMLP29590 882 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CCND3P30281 292 aaPredicted RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 GNA15P30679 374 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 MAN2A2P49641 1150 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 RUNX1T1Q06455 604 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CUL1Q13616 776 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 SNX17Q15036 470 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 DPCR1Q3MIW9 517 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 DCAF4L1Q3SXM0 396 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms