RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 TJP3O95049 919 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 KDELR1P24390 212 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 KCNJ1P48048 391 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 CDR1P51861 262 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 CCL23P55773 120 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 ATP11AP98196 1134 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 CCNG2Q16589 344 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 EFHC1Q5JVL4 640 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 FBXO46Q6PJ61 603 aaPredicted RBP23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 CCDC105Q8IYK2 499 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 FAM172AQ8WUF8 416 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 GDAP1L1Q96MZ0 367 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 DDX23Q9BUQ8 820 aaKnown RBP23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 PPP1R12CQ9BZL4 782 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 UBXN6Q9BZV1 441 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 FAM114A2Q9NRY5 505 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 TMLHEQ9NVH6 421 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 MICAL3Q7RTP6 2002 aa23.6■■□□□ 1.37
VCPKMT-205ENST00000569518 HHLA1C9JL84 531 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 HSF2BPO75031 334 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 FAM153BP0C7A2 387 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 CYP2C18P33260 490 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 TNNT3P45378 269 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 OR1G1P47890 313 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 GATMP50440 423 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 DRG2P55039 364 aaKnown RBP23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 MRPS5P82675 430 aaKnown RBP23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 CDO1Q16878 200 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 FAM153CQ494X1 144 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 RAB41Q5JT25 222 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 SND1Q7KZF4 910 aaKnown RBP eCLIP23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 LRRTM3Q86VH5 581 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 ABI1Q8IZP0 508 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 FAM193BQ96PV7 902 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 KCNK16Q96T55 309 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 ADAM33Q9BZ11 813 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 VIPAS39Q9H9C1 493 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 LRRC4Q9HBW1 653 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 FAM153AQ9UHL3 310 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 PATJQ8NI35 1801 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 ENDOD1O94919 500 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 TFE3P19532 575 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 HDAC4P56524 1084 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 ODF2Q5BJF6 829 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 THEM5Q8N1Q8 247 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 TMEM209Q96SK2 561 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 NCAPGQ9BPX3 1015 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 RHOBTB2Q9BYZ6 727 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 NEUROG2Q9H2A3 272 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 NRDE2Q9H7Z3 1164 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 NGRNQ9NPE2 291 aaKnown RBP23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 OGFRQ9NZT2 677 aa23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 PRG3Q9Y2Y8 225 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-205ENST00000569518 VWA8A3KMH1 1905 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 PRPSAP2O60256 369 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 OAZ2O95190 189 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 ECEL1O95672 775 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 NDUFV1P49821 464 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 ARSEP51690 589 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 TKTL1P51854 596 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 YWHAHQ04917 246 aaPredicted RBP23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 SNX1Q13596 522 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 KAZNQ674X7 775 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 GPRIN1Q7Z2K8 1008 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 DNAJC5GQ8N7S2 189 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 DPH5Q9H2P9 285 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 LRFN2Q9ULH4 789 aa23.58■■□□□ 1.37
VCPKMT-205ENST00000569518 FNDC1Q4ZHG4 1894 aaPredicted RBP23.58■■□□□ 1.36
VCPKMT-205ENST00000569518 HOXA2O43364 376 aa23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 RRP9O43818 475 aaKnown RBP23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 DAB1O75553 588 aa23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 FBXO21O94952 628 aa23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 CD48P09326 243 aa23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 MATKP42679 507 aa23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 MAPRE1Q15691 268 aaKnown RBP23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 NPAS4Q8IUM7 802 aa23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 SIX6OS1Q8N1H7 587 aa23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 TEKT4Q8WW24 435 aa23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 NDRG1Q92597 394 aaKnown RBP23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 TBCBQ99426 244 aa23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 HPCAL4Q9UM19 191 aa23.57■■□□□ 1.36
VCPKMT-205ENST00000569518 DESP17661 470 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 RABGGTBP53611 331 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 TSPY1Q01534 308 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 HLTFQ14527 1009 aaKnown RBP eCLIP23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 DRICH1Q6PGQ1 229 aaPredicted RBP23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 KCTD6Q8NC69 237 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 HSPH1Q92598 858 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 VWCEQ96DN2 955 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 TRIM31Q9BZY9 425 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 COL4A4P53420 1690 aaPredicted RBP23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 TRAPPC3O43617 180 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 GJA8P48165 433 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 YWHAZP63104 245 aaKnown RBP23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 BOLA3Q53S33 107 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 SYDE1Q6ZW31 735 aaPredicted RBP23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 BBS12Q6ZW61 710 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 NT5C3BQ969T7 300 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 SLC2A13Q96QE2 648 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms