RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 NSUN3Q9H649 340 aaKnown RBP11.01□□□□□ -0.65
CDH3-210ENST00000569117 CYP4F11Q9HBI6 524 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 TAS2R14Q9NYV8 317 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 MAP10Q9P2G4 905 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 INSL5Q9Y5Q6 135 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 HCFC2Q9Y5Z7 792 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 EPN1Q9Y6I3 576 aaPredicted RBP11.01□□□□□ -0.65
CDH3-210ENST00000569117 NCANO14594 1321 aa11.01□□□□□ -0.65
CDH3-210ENST00000569117 PRRG1O14668 218 aa11□□□□□ -0.65
CDH3-210ENST00000569117 RTN2O75298 545 aa11□□□□□ -0.65
CDH3-210ENST00000569117 C8AP07357 584 aa11□□□□□ -0.65
CDH3-210ENST00000569117 POU3F3P20264 500 aaPredicted RBP11□□□□□ -0.65
CDH3-210ENST00000569117 HOXA9P31269 272 aa11□□□□□ -0.65
CDH3-210ENST00000569117 ELF1P32519 619 aa11□□□□□ -0.65
CDH3-210ENST00000569117 GRIK1P39086 918 aa11□□□□□ -0.65
CDH3-210ENST00000569117 ACADSBP45954 432 aa11□□□□□ -0.65
CDH3-210ENST00000569117 NRIP1P48552 1158 aa11□□□□□ -0.65
CDH3-210ENST00000569117 CDR1P51861 262 aa11□□□□□ -0.65
CDH3-210ENST00000569117 GSCP56915 257 aaPredicted RBP11□□□□□ -0.65
CDH3-210ENST00000569117 PLD1Q13393 1074 aa11□□□□□ -0.65
CDH3-210ENST00000569117 KCNC3Q14003 757 aa11□□□□□ -0.65
CDH3-210ENST00000569117 GRIN2CQ14957 1233 aa11□□□□□ -0.65
CDH3-210ENST00000569117 MGAT5BQ3V5L5 792 aa11□□□□□ -0.65
CDH3-210ENST00000569117 RAB41Q5JT25 222 aa11□□□□□ -0.65
CDH3-210ENST00000569117 C10orf76Q5T2E6 689 aa11□□□□□ -0.65
CDH3-210ENST00000569117 LIN9Q5TKA1 542 aa11□□□□□ -0.65
CDH3-210ENST00000569117 PMF1Q6P1K2 205 aa11□□□□□ -0.65
CDH3-210ENST00000569117 CCDC149Q6ZUS6 474 aa11□□□□□ -0.65
CDH3-210ENST00000569117 KREMEN2Q8NCW0 462 aa11□□□□□ -0.65
CDH3-210ENST00000569117 SLC7A14Q8TBB6 771 aa11□□□□□ -0.65
CDH3-210ENST00000569117 IPO4Q8TEX9 1081 aaKnown RBP11□□□□□ -0.65
CDH3-210ENST00000569117 HDAC7Q8WUI4 952 aa11□□□□□ -0.65
CDH3-210ENST00000569117 CPA5Q8WXQ8 436 aa11□□□□□ -0.65
CDH3-210ENST00000569117 TRIM11Q96F44 468 aa11□□□□□ -0.65
CDH3-210ENST00000569117 VCPIP1Q96JH7 1222 aa11□□□□□ -0.65
CDH3-210ENST00000569117 ZFRQ96KR1 1074 aaKnown RBP11□□□□□ -0.65
CDH3-210ENST00000569117 SPATA17Q96L03 361 aa11□□□□□ -0.65
CDH3-210ENST00000569117 HSFY1Q96LI6 401 aa11□□□□□ -0.65
CDH3-210ENST00000569117 PLEKHA4Q9H4M7 779 aa11□□□□□ -0.65
CDH3-210ENST00000569117 PRDM12Q9H4Q4 367 aa11□□□□□ -0.65
CDH3-210ENST00000569117 TLE6Q9H808 572 aa11□□□□□ -0.65
CDH3-210ENST00000569117 MAN1C1Q9NR34 630 aa11□□□□□ -0.65
CDH3-210ENST00000569117 DPP7Q9UHL4 492 aa11□□□□□ -0.65
CDH3-210ENST00000569117 PRRC2BQ5JSZ5 2229 aaKnown RBP10.99□□□□□ -0.65
CDH3-210ENST00000569117 E5RJQ4 531 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 TNFRSF10BO14763 440 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 SOAT2O75908 522 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 ERBB2P04626 1255 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 CALB1P05937 261 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 POU2F2P09086 479 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 EPCAMP16422 314 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 GABRB2P47870 512 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 GPR15P49685 360 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 RGS7P49802 495 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 SLC5A3P53794 718 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 SNX16P57768 344 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 ADIGQ0VDE8 80 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 PTP4A2Q12974 167 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 SPA17Q15506 151 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 DDR2Q16832 855 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 CCDC122Q5T0U0 273 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 ELMSAN1Q6PJG2 1045 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 BRICD5Q6PL45 260 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 DNAJC14Q6Y2X3 702 aaPredicted RBP10.99□□□□□ -0.65
CDH3-210ENST00000569117 MMS22LQ6ZRQ5 1243 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 TOGARAM2Q6ZUX3 1019 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 GPRIN1Q7Z2K8 1008 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 TMEM110Q86TL2 294 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 ERICH1Q86X53 443 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 SCN4BQ8IWT1 228 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 MCOLN2Q8IZK6 566 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 SCML4Q8N228 414 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 PPP1R13BQ96KQ4 1090 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 C11orf70Q9BRQ4 267 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 DESI2Q9BSY9 194 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 MIS12Q9H081 205 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 LUC7LQ9NQ29 371 aaKnown RBP10.99□□□□□ -0.65
CDH3-210ENST00000569117 STRIP2Q9ULQ0 834 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 REXO2Q9Y3B8 237 aaKnown RBP10.99□□□□□ -0.65
CDH3-210ENST00000569117 DENND4CQ5VZ89 1909 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 C2orf16Q68DN1 1984 aa10.99□□□□□ -0.65
CDH3-210ENST00000569117 FAM92AA1XBS5 289 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 ANKRD62A6NC57 917 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 TMCO5BA8MYB1 307 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 PER2O15055 1255 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 SART1O43290 800 aaKnown RBP10.98□□□□□ -0.65
CDH3-210ENST00000569117 PAPLNO95428 1278 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 FTLP02792 175 aaPredicted RBP10.98□□□□□ -0.65
CDH3-210ENST00000569117 H2AFZP0C0S5 128 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 TMEM253P0C7T8 217 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 SPATA31D3P0C874 917 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 MYBL1P10243 752 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 SCNN1AP37088 669 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 ALDH1A3P47895 512 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 EPHB3P54753 998 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 KRT83P78385 493 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 TWF1Q12792 350 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 HYAL1Q12794 435 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 ADGRE1Q14246 886 aa10.98□□□□□ -0.65
CDH3-210ENST00000569117 VEPH1Q14D04 833 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms