RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 CISHQ9NSE2 258 aa21.32■■□□□ 1
ABCA3-206ENST00000569062 SMPD4Q9NXE4 827 aa21.32■■□□□ 1
ABCA3-206ENST00000569062 GMIPQ9P107 970 aa21.32■■□□□ 1
ABCA3-206ENST00000569062 HHLA1C9JL84 531 aa21.31■■□□□ 1
ABCA3-206ENST00000569062 GJA4P35212 333 aa21.31■■□□□ 1
ABCA3-206ENST00000569062 PGFP49763 221 aa21.31■■□□□ 1
ABCA3-206ENST00000569062 STX17P56962 302 aa21.31■■□□□ 1
ABCA3-206ENST00000569062 CAMK4Q16566 473 aa21.31■■□□□ 1
ABCA3-206ENST00000569062 DGKKQ5KSL6 1271 aa21.31■■□□□ 1
ABCA3-206ENST00000569062 NAIF1Q69YI7 327 aaPredicted RBP21.31■■□□□ 1
ABCA3-206ENST00000569062 ZC3H14Q6PJT7 736 aaKnown RBP21.31■■□□□ 1
ABCA3-206ENST00000569062 MAMSTRQ6ZN01 415 aa21.31■■□□□ 1
ABCA3-206ENST00000569062 CPA6Q8N4T0 437 aa21.31■■□□□ 1
ABCA3-206ENST00000569062 CCSER2Q9H7U1 834 aa21.31■■□□□ 1
ABCA3-206ENST00000569062 METTL14Q9HCE5 456 aaKnown RBP21.31■■□□□ 1
ABCA3-206ENST00000569062 FBRSL1Q9HCM7 1045 aaKnown RBP21.31■■□□□ 1
ABCA3-206ENST00000569062 COMMD8Q9NX08 183 aa21.31■■□□□ 1
ABCA3-206ENST00000569062 ATG2BQ96BY7 2078 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 TRDMT1O14717 391 aaKnown RBP21.3■■□□□ 1
ABCA3-206ENST00000569062 SCAMP3O14828 347 aaKnown RBP21.3■■□□□ 1
ABCA3-206ENST00000569062 COCHO43405 550 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 ZDHHC11BP0C7U3 371 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 MBL2P11226 248 aaPredicted RBP21.3■■□□□ 1
ABCA3-206ENST00000569062 RAD23BP54727 409 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 SATB1Q01826 763 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 CCDC40Q4G0X9 1142 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 TMEM196Q5HYL7 178 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 SNX30Q5VWJ9 437 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 FSTL4Q6MZW2 842 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 SLC4A11Q8NBS3 891 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 NELL1Q92832 810 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 ATP2A3Q93084 1043 aa21.3■■□□□ 1
ABCA3-206ENST00000569062 HEXIM2Q96MH2 286 aaKnown RBP21.3■■□□□ 1
ABCA3-206ENST00000569062 TDGF1P13385 188 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 FMO5P49326 533 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 GALK1P51570 392 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 CCR3P51677 355 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 LRMPQ12912 555 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 HECTD3Q5T447 861 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 SPEM1Q8N4L4 309 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 TMEM176AQ96HP8 235 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 ZFRQ96KR1 1074 aaKnown RBP21.29■■□□□ 1
ABCA3-206ENST00000569062 SEMA4AQ9H3S1 761 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 FBXO44Q9H4M3 255 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 C2orf42Q9NWW7 574 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 CFAP97Q9P2B7 532 aa21.29■■□□□ 1
ABCA3-206ENST00000569062 BICDL2A1A5D9 508 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 LMNAP02545 664 aaKnown RBP21.28■■□□□ 1
ABCA3-206ENST00000569062 ACO1P21399 889 aaKnown RBP21.28■■□□□ 1
ABCA3-206ENST00000569062 CXCL12P48061 93 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 AMPD2Q01433 879 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 PAK1Q13153 545 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 CUL2Q13617 745 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 FOXR2Q6PJQ5 311 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 TTC39CQ8N584 583 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 ZBTB44Q8NCP5 570 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 DUSP16Q9BY84 665 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 DNAI2Q9GZS0 605 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 ZSCAN32Q9NX65 697 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 KIAA1468Q9P260 1216 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 CFAP54Q96N23 3096 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 MYOFQ9NZM1 2061 aa21.28■■□□□ 1
ABCA3-206ENST00000569062 KIAA1549LQ6ZVL6 1849 aa21.27■■□□□ 1
ABCA3-206ENST00000569062 CYP26A1O43174 497 aa21.27■■□□□ 1
ABCA3-206ENST00000569062 EGFP01133 1207 aa21.27■■□□□ 1
ABCA3-206ENST00000569062 ANP32AP39687 249 aaKnown RBP21.27■■□□□ 1
ABCA3-206ENST00000569062 TUBP50607 506 aa21.27■■□□□ 1
ABCA3-206ENST00000569062 GRSF1Q12849 480 aaKnown RBP eCLIP21.27■■□□□ 1
ABCA3-206ENST00000569062 PKN3Q6P5Z2 889 aa21.27■■□□□ 1
ABCA3-206ENST00000569062 SYNPOQ8N3V7 929 aa21.27■■□□□ 1
ABCA3-206ENST00000569062 P2RY13Q9BPV8 354 aa21.27■■□□□ 1
ABCA3-206ENST00000569062 PNPLA8Q9NP80 782 aa21.27■■□□□ 1
ABCA3-206ENST00000569062 TLR8Q9NR97 1041 aaKnown RBP21.27■■□□□ 1
ABCA3-206ENST00000569062 OSER1Q9NX31 292 aa21.27■■□□□ 1
ABCA3-206ENST00000569062 PCDHGA2Q9Y5H1 932 aa21.27■■□□□ 1
ABCA3-206ENST00000569062 FRYLO94915 3013 aa21.26■□□□□ 0.99
ABCA3-206ENST00000569062 NFATC1O95644 943 aa21.26■□□□□ 0.99
ABCA3-206ENST00000569062 HOXC13P31276 330 aa21.26■□□□□ 0.99
ABCA3-206ENST00000569062 NR1H3Q13133 447 aa21.26■□□□□ 0.99
ABCA3-206ENST00000569062 PPP2R5DQ14738 602 aa21.26■□□□□ 0.99
ABCA3-206ENST00000569062 ADGRG2Q8IZP9 1017 aa21.26■□□□□ 0.99
ABCA3-206ENST00000569062 TRIML1Q8N9V2 468 aa21.26■□□□□ 0.99
ABCA3-206ENST00000569062 ATRIPQ8WXE1 791 aa21.26■□□□□ 0.99
ABCA3-206ENST00000569062 CD101Q93033 1021 aa21.26■□□□□ 0.99
ABCA3-206ENST00000569062 SRRTQ9BXP5 876 aaKnown RBP21.26■□□□□ 0.99
ABCA3-206ENST00000569062 FAM124BQ9H5Z6 455 aaPredicted RBP21.26■□□□□ 0.99
ABCA3-206ENST00000569062 SCML2Q9UQR0 700 aa21.26■□□□□ 0.99
ABCA3-206ENST00000569062 WDR87Q6ZQQ6 2873 aa21.26■□□□□ 0.99
ABCA3-206ENST00000569062 TLR5O60602 858 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 LILRB5O75023 590 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 TBX18O95935 607 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 CYP17A1P05093 508 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 KIF11P52732 1056 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 GAB4Q2WGN9 574 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 ARHGAP17Q68EM7 881 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 DDX42Q86XP3 938 aaKnown RBP eCLIP21.25■□□□□ 0.99
ABCA3-206ENST00000569062 UBR7Q8N806 425 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 KIAA1958Q8N8K9 716 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 SUMF1Q8NBK3 374 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 EZH1Q92800 747 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms