RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SERHLQ9NQF3 203 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 LRIT1Q9P2V4 623 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 MED16Q9Y2X0 877 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 ARHGEF28Q8N1W1 1705 aaKnown RBP4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 ADGRA2Q96PE1 1338 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 BTAF1O14981 1849 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 DHX57Q6P158 1386 aaKnown RBP4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 PIK3C2GO75747 1445 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 SPATA31E1Q6ZUB1 1445 aa4.11□□□□□ -1.75
HMGB1P6-201ENST00000569046 TOPAZ1Q8N9V7 1692 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 COL18A1P39060 1754 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 OVOL3O00110 214 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 CAND2O75155 1236 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 GRPP07492 148 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 ITGALP20701 1170 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 SLC11A2P49281 568 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 UCP3P55916 312 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 SP2Q02086 613 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 PTPRRQ15256 657 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 SLC15A2Q16348 729 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 LONRF3Q496Y0 759 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 KAZNQ674X7 775 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 DNAJC10Q8IXB1 793 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 MYO1HQ8N1T3 1032 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 TCP11L2Q8N4U5 519 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 FAM98AQ8NCA5 519 aaKnown RBP4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 B3GALNT2Q8NCR0 500 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 IL31RAQ8NI17 732 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 SLC9A6Q92581 669 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 PGBD1Q96JS3 809 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 MPHOSPH6Q99547 160 aaKnown RBP4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 HEPHQ9BQS7 1158 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 SPATA5L1Q9BVQ7 753 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 ACTRT3Q9BYD9 372 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 TRIM54Q9BYV2 358 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 TPSD1Q9BZJ3 242 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 TMEM60Q9H2L4 133 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 R3HDMLQ9H3Y0 253 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 RIOX1Q9H6W3 641 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 ARNT2Q9HBZ2 717 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 PIH1D1Q9NWS0 290 aaKnown RBP4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 PARD3Q8TEW0 1356 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 DLC1Q96QB1 1528 aa4.1□□□□□ -1.75
HMGB1P6-201ENST00000569046 TRIAP1O43715 76 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 SOAT2O75908 522 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 C1QL1O75973 258 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 LDHAP00338 332 aaKnown RBP4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 ERBB2P04626 1255 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 PAX3P23760 479 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 LILRA4P59901 499 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 IRX6P78412 446 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 ITIH3Q06033 890 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 ARHGAP29Q52LW3 1261 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 TOM1L2Q6ZVM7 507 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 MAEAQ7L5Y9 396 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 TTC8Q8TAM2 541 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 MAML1Q92585 1016 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 RFKQ969G6 155 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 FAM136AQ96C01 138 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 BBC3Q96PG8 261 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 CDK19Q9BWU1 502 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 C22orf23Q9BZE7 217 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 SMURF2Q9HAU4 748 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 IL17RBQ9NRM6 502 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 KLC4Q9NSK0 619 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 STK32BQ9NY57 414 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 XPR1Q9UBH6 696 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 DKK3Q9UBP4 350 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 TLK1Q9UKI8 766 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 L1RE1Q9UN81 338 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 PLEKHM1Q9Y4G2 1056 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 USP19O94966 1318 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 ACEP12821 1306 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 TULP4Q9NRJ4 1543 aa4.09□□□□□ -1.75
HMGB1P6-201ENST00000569046 RGPD2P0DJD1 1756 aa4.09□□□□□ -1.76
HMGB1P6-201ENST00000569046 OVOS2A0A0G2JMS6 1433 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 OVOS2A0A0J9YW53 1432 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 A0A1W2PPL8 197 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 LINC00473A8K010 186 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 VSTM5A8MXK1 200 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 TMEM233B4DJY2 109 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 PPM1DO15297 605 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 PLIN1O60240 522 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 KRT18P05783 430 aaKnown RBP4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 COL5A2P05997 1499 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 ATXN1LP0C7T5 689 aaKnown RBP4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 U2AF1L5P0DN76 240 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 PCSK6P29122 969 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 CD6P30203 668 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 GRIA3P42263 894 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 NXPH1P58417 271 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 GPSM2P81274 684 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 U2AF1Q01081 240 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 CTBP1Q13363 440 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 GALEQ14376 348 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 GRM3Q14832 879 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 IQCB1Q15051 598 aa4.08□□□□□ -1.76
HMGB1P6-201ENST00000569046 CNN3Q15417 329 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms