RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TNNC1P63316 161 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 SEMA3BQ13214 749 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 DUOXA1Q1HG43 343 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 SNX30Q5VWJ9 437 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 CBWD2Q8IUF1 395 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 TMEFF1Q8IYR6 380 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 PGBD3Q8N328 593 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 HDDC3Q8N4P3 179 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 OR6B3Q8NGW1 331 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 HMGB4Q8WW32 186 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 RLN3Q8WXF3 142 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 FAM84AQ96KN4 292 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 FGFBP2Q9BYJ0 223 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 TNMDQ9H2S6 317 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 COMMD8Q9NX08 183 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 SMPD4Q9NXE4 827 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 PILRBQ9UKJ0 227 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 CIZ1Q9ULV3 898 aaPredicted RBP16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 SLC6A14Q9UN76 642 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 MSRB2Q9Y3D2 182 aa16.75■□□□□ 0.27
HERPUD1-215ENST00000568676 PLXND1Q9Y4D7 1925 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 TCRBV21S2A2A0A5A6 115 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 ZNF217O75362 1048 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 TNNI1P19237 187 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 ATICP31939 592 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 PTGER3P43115 390 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 GFPT1Q06210 699 aaPredicted RBP16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 SNRNP35Q16560 246 aaKnown RBP16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 WDR72Q3MJ13 1102 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 LY6G5CQ5SRR4 150 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 HECTD3Q5T447 861 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 B3GALNT2Q8NCR0 500 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 CLIC6Q96NY7 704 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 MRPL45Q9BRJ2 306 aaKnown RBP16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 CUEDC2Q9H467 287 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 TMEM74BQ9NUR3 256 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 DEC1Q9P2X7 70 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 MBD1Q9UIS9 605 aaPredicted RBP16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 SH3BP1Q9Y3L3 701 aa16.74■□□□□ 0.27
HERPUD1-215ENST00000568676 FRYQ5TBA9 3013 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 TBC1D3BA6NDS4 549 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 ADAM23O75077 832 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 SERPINF2P08697 491 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 SPINK2P20155 84 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 MAPK8P45983 427 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 AMPD3Q01432 767 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 PSMD6Q15008 389 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 PIP4P1Q86T03 277 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 C12orf40Q86WS4 652 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 ETFBKMTQ8IXQ9 262 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 PHTF2Q8N3S3 785 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 ZNF513Q8N8E2 541 aaPredicted RBP16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 FBXO32Q969P5 355 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 CGRRF1Q99675 332 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 STARD13Q9Y3M8 1113 aa16.73■□□□□ 0.27
HERPUD1-215ENST00000568676 UBE4BO95155 1302 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 A8MXQ7 604 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 COCHO43405 550 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 CST3P01034 146 aaPredicted RBP16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 CFIP05156 583 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 DLATP10515 647 aaKnown RBP16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 RPL6Q02878 288 aaKnown RBP16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 KDSRQ06136 332 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 MESP2Q0VG99 397 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 TRPC3Q13507 836 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 SLC39A14Q15043 492 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 EMC10Q5UCC4 262 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 ARMCX6Q7L4S7 300 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 TERB1Q8NA31 727 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 ZNF507Q8TCN5 953 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 ZCCHC14Q8WYQ9 949 aaKnown RBP16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 SYAP1Q96A49 352 aaPredicted RBP16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 TNIP3Q96KP6 325 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 ZNF518BQ9C0D4 1074 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 SPHK2Q9NRA0 654 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 IL37Q9NZH6 218 aa16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 CGNQ9P2M7 1197 aaKnown RBP16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 TNRC6BQ9UPQ9 1833 aaKnown RBP16.72■□□□□ 0.27
HERPUD1-215ENST00000568676 FAM92AA1XBS5 289 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 FAM221BA6H8Z2 402 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 ANTXRLA6NF34 631 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 SRRM3A6NNA2 597 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 OPHN1O60890 802 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 TULP3O75386 442 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 SYPP08247 313 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 ITPKAP23677 461 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 NTSR1P30989 418 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 SIM1P81133 766 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 SLC14A1Q13336 389 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 CUL4AQ13619 759 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 SDE2Q6IQ49 451 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 CNNM4Q6P4Q7 775 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 SFTPA1Q8IWL2 248 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 XXYLT1Q8NBI6 393 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 ZFRQ96KR1 1074 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 B3GNT5Q9BYG0 378 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 VRTNQ9H8Y1 702 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 CAPN10Q9HC96 672 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 DMAP1Q9NPF5 467 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 AGPAT3Q9NRZ7 376 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms