RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 MLNP12872 115 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ACADSP16219 412 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 TAL1P17542 331 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 GCKP35557 465 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 FDFT1P37268 417 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ACADSBP45954 432 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ATP5OP48047 213 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ZNF135P52742 658 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 HK2P52789 917 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 BASP1P80723 227 aaKnown RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 OTUD4Q01804 1114 aaKnown RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 KCNC4Q03721 635 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 SLC18A2Q05940 514 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 PTPN11Q06124 597 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 PTK7Q13308 1070 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 MOGSQ13724 837 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 CAPSQ13938 189 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 DPYSL3Q14195 570 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 NOMO1Q15155 1222 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 TAF11Q15544 211 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 CCDC142Q17RM4 750 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 BBS9Q3SYG4 887 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 MSS51Q4VC12 460 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 DAB2IPQ5VWQ8 1189 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 NLRP9Q7RTR0 991 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 TAS1R3Q7RTX0 852 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 TRMT1LQ7Z2T5 733 aaKnown RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 SESTD1Q86VW0 696 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 CRLF3Q8IUI8 442 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 PSTKQ8IV42 348 aaKnown RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 WDR75Q8IWA0 830 aaKnown RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 KIRREL3Q8IZU9 778 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ARHGAP18Q8N392 663 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ENDOVQ8N8Q3 282 aaKnown RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 FBXO36Q8NEA4 188 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 PPP1R14CQ8TAE6 165 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 GABPB2Q8TAK5 448 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 CCDC110Q8TBZ0 833 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 SPATA18Q8TC71 538 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ASAP3Q8TDY4 903 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 PPP4R1Q8TF05 950 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 AGAP11Q8TF27 550 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 PRPF31Q8WWY3 499 aaKnown RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 MIEF2Q96C03 454 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 FAF2Q96CS3 445 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 MCRS1Q96EZ8 462 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 TMEM176AQ96HP8 235 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 C7orf26Q96N11 449 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 TEPSINQ96N21 525 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ZNF670Q9BS34 389 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 BTBD10Q9BSF8 475 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 DHRS4Q9BTZ2 278 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 BCO2Q9BYV7 579 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 GLIS2Q9BZE0 524 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 TLE6Q9H808 572 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 APOBEC3GQ9HC16 384 aaKnown RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 SPATS2LQ9NUQ6 558 aaKnown RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ZMYND8Q9ULU4 1186 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 USP18Q9UMW8 372 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 C2CD2Q9Y426 696 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 CSADQ9Y600 493 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 ZNF646O15015 1829 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-250ENST00000568290 COL1A2P08123 1366 aa7.96□□□□□ -1.14
ATXN3-250ENST00000568290 TCRBV5S1A1TA0A578 114 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 BCLAF3A2AJT9 711 aaKnown RBP7.95□□□□□ -1.14
ATXN3-250ENST00000568290 F8VP50 259 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 MDM4O15151 490 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 TP73O15350 636 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 MSCO60682 206 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 MAGEC1O60732 1142 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 H2AFYO75367 372 aaKnown RBP7.95□□□□□ -1.14
ATXN3-250ENST00000568290 LGR5O75473 907 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 FARP2O94887 1054 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-250ENST00000568290 KLHL2O95198 593 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 TRUB2O95900 331 aaKnown RBP7.95□□□□□ -1.14
ATXN3-250ENST00000568290 ZBED1O96006 694 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 KRT19P08727 400 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 FAM163BP0C2L3 166 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 HARSP12081 509 aaKnown RBP7.95□□□□□ -1.14
ATXN3-250ENST00000568290 TPSB2P20231 275 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 EDNRBP24530 442 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 GRK2P25098 689 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 BRD2P25440 801 aaKnown RBP7.95□□□□□ -1.14
ATXN3-250ENST00000568290 SDC4P31431 198 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 VHLP40337 213 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 BAG6P46379 1132 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 HMGCS2P54868 508 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 BCAR1P56945 870 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 WDR4P57081 412 aaKnown RBP7.95□□□□□ -1.14
ATXN3-250ENST00000568290 YWHAGP61981 247 aaKnown RBP eCLIP7.95□□□□□ -1.14
ATXN3-250ENST00000568290 IRX1P78414 480 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-250ENST00000568290 SP4Q02446 784 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 PDE4CQ08493 712 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 LAMTOR4Q0VGL1 99 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 TTLL4Q14679 1199 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 TMEM132BQ14DG7 1078 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 TPSAB1Q15661 275 aa7.95□□□□□ -1.14
ATXN3-250ENST00000568290 PKN2Q16513 984 aaKnown RBP7.95□□□□□ -1.14
ATXN3-250ENST00000568290 GSTA3Q16772 222 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms