RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 ADH1CP00326 375 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 NTSR1P30989 418 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 MATKP42679 507 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 NCKAP1LP55160 1127 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 CLDN6P56747 220 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 SLC7A9P82251 487 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 MYO1EQ12965 1108 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 ZRSR1Q15695 479 aaKnown RBP12.59□□□□□ -0.39
CLK3-222ENST00000568232 SMAD1Q15797 465 aaKnown RBP12.59□□□□□ -0.39
CLK3-222ENST00000568232 SV2CQ496J9 727 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 TTC38Q5R3I4 469 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 C10orf76Q5T2E6 689 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 EGFLAMQ63HQ2 1017 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 DHRS13Q6UX07 377 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 DBX2Q6ZNG2 339 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 TRMT11Q7Z4G4 463 aaKnown RBP12.59□□□□□ -0.39
CLK3-222ENST00000568232 IGSF22Q8N9C0 903 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 NSUN7Q8NE18 718 aaKnown RBP12.59□□□□□ -0.39
CLK3-222ENST00000568232 CDC6Q99741 560 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 TIPINQ9BVW5 301 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 TRPM5Q9NZQ8 1165 aa12.59□□□□□ -0.39
CLK3-222ENST00000568232 ZNF840PA6NDX5 716 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 MEI4A8MW99 385 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.58□□□□□ -0.4
CLK3-222ENST00000568232 TISP43B9A030 160 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 TULP1O00294 542 aaPredicted RBP12.58□□□□□ -0.4
CLK3-222ENST00000568232 SLC9A3R1O14745 358 aaPredicted RBP12.58□□□□□ -0.4
CLK3-222ENST00000568232 CAPN9O14815 690 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 ARHGAP6O43182 974 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 ATP2C2O75185 946 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 TULP3O75386 442 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 ABL1P00519 1130 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 ZNF883P0CG24 379 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 HLA-EP13747 358 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 PDE6CP51160 858 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 SEMG2Q02383 582 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 CFAP221Q4G0U5 840 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 ETFBKMTQ8IXQ9 262 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 KCNV2Q8TDN2 545 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 DNASE2BQ8WZ79 361 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 FOXJ1Q92949 421 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 MRGPRX1Q96LB2 322 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 PLIN2Q99541 437 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 KIF2CQ99661 725 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 MMTAG2Q9BU76 263 aaKnown RBP12.58□□□□□ -0.4
CLK3-222ENST00000568232 ASB7Q9H672 318 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 DEC1Q9P2X7 70 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 KCNG1Q9UIX4 513 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 C2CD2Q9Y426 696 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 ANAPC1Q9H1A4 1944 aa12.58□□□□□ -0.4
CLK3-222ENST00000568232 ANKRD63C9JTQ0 380 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 FLRT2O43155 660 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 ZBTB24O43167 697 aaPredicted RBP12.57□□□□□ -0.4
CLK3-222ENST00000568232 CER1O95813 267 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 PIGRP01833 764 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 GAD2Q05329 585 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 ORC2Q13416 577 aaPredicted RBP12.57□□□□□ -0.4
CLK3-222ENST00000568232 IL17AQ16552 155 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 ME3Q16798 604 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 KRT79Q5XKE5 535 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
CLK3-222ENST00000568232 LRRC69Q6ZNQ3 347 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 CHPFQ8IZ52 775 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 TERB1Q8NA31 727 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 TOE1Q96GM8 510 aaKnown RBP12.57□□□□□ -0.4
CLK3-222ENST00000568232 FAM84AQ96KN4 292 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 GPR174Q9BXC1 333 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 CLMPQ9H6B4 373 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 DNMT3LQ9UJW3 386 aa12.57□□□□□ -0.4
CLK3-222ENST00000568232 COL12A1Q99715 3063 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 MUC22E2RYF6 1773 aaPredicted RBP12.56□□□□□ -0.4
CLK3-222ENST00000568232 A0A1B0GVT2 93 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 WASH3PC4AMC7 463 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 BCAT2O15382 392 aaPredicted RBP12.56□□□□□ -0.4
CLK3-222ENST00000568232 TNFSF14O43557 240 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 HUS1O60921 280 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 OLFM2O95897 454 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 MBL2P11226 248 aaPredicted RBP12.56□□□□□ -0.4
CLK3-222ENST00000568232 NCAM1P13591 858 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 PFKLP17858 780 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 BDNFP23560 247 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 CD6P30203 668 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 POLR2BP30876 1174 aaKnown RBP12.56□□□□□ -0.4
CLK3-222ENST00000568232 GRIK1P39086 918 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 WNT7BP56706 349 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 MYL7Q01449 175 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 MMRN1Q13201 1228 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 PTPRNQ16849 979 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 ANO4Q32M45 955 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 ARSHQ5FYA8 562 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 DCAF12L1Q5VU92 463 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 BTBD8Q5XKL5 378 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 DENND5BQ6ZUT9 1274 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 GPR155Q7Z3F1 870 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 TMEM25Q86YD3 366 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 KIAA1958Q8N8K9 716 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 SYT2Q8N9I0 419 aaPredicted RBP12.56□□□□□ -0.4
CLK3-222ENST00000568232 GTF3C6Q969F1 213 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 SPATA17Q96L03 361 aa12.56□□□□□ -0.4
CLK3-222ENST00000568232 ZNF560Q96MR9 790 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms