RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ARL14EPQ8N8R7 260 aaPredicted RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 CCDC150Q8NCX0 1101 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 PDZD8Q8NEN9 1154 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 ENGASEQ8NFI3 743 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 TTC8Q8TAM2 541 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 SPATA20Q8TB22 786 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 RIN3Q8TB24 985 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 TAS1R2Q8TE23 839 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 SH3RF2Q8TEC5 729 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 SMARCE1Q969G3 411 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 FAXDC2Q96IV6 333 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 TIGD1Q96MW7 591 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 CYP2S1Q96SQ9 504 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 TSG101Q99816 390 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 MED10Q9BTT4 135 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 ZNF518BQ9C0D4 1074 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 DNAI2Q9GZS0 605 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 SDCBP2Q9H190 292 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 EPC1Q9H2F5 836 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 FAM124BQ9H5Z6 455 aaPredicted RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 CYP3A43Q9HB55 503 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 TMEM8AQ9HCN3 771 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 CSNK1G1Q9HCP0 422 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 DMAP1Q9NPF5 467 aaPredicted RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 TMEM30AQ9NV96 361 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 COMMD8Q9NX08 183 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 DUS2Q9NX74 493 aaKnown RBP5.08□□□□□ -1.6
CLK3-219ENST00000567805 VPS9D1Q9Y2B5 631 aa5.08□□□□□ -1.6
CLK3-219ENST00000567805 FAM92AA1XBS5 289 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 LEFTY2O00292 366 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 TRDMT1O14717 391 aaKnown RBP5.07□□□□□ -1.6
CLK3-219ENST00000567805 SLC9A3R1O14745 358 aaPredicted RBP5.07□□□□□ -1.6
CLK3-219ENST00000567805 TNFRSF10BO14763 440 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 SLC16A3O15427 465 aaKnown RBP5.07□□□□□ -1.6
CLK3-219ENST00000567805 ATG13O75143 517 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 AP1G2O75843 785 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 OLFM2O95897 454 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 ABL1P00519 1130 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 FAM200BP0CF97 657 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 CCDC130P13994 396 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 DRD1P21728 446 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 HOXA6P31267 233 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 GJA4P35212 333 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 PPP1R2P41236 205 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 MXI1P50539 228 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 TUBP50607 506 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 SLC5A3P53794 718 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 ZXDBP98169 803 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 FKBP3Q00688 224 aaKnown RBP5.07□□□□□ -1.6
CLK3-219ENST00000567805 SATB1Q01826 763 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 LRRC63Q05C16 580 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 IFRD2Q12894 506 aaPredicted RBP5.07□□□□□ -1.6
CLK3-219ENST00000567805 NR1H3Q13133 447 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 STIM1Q13586 685 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 FBXO43Q4G163 708 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 HECTD3Q5T447 861 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 SPOPLQ6IQ16 392 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 FSTL4Q6MZW2 842 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 Q6ZS52 159 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 PAQR9Q6ZVX9 377 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 DDX42Q86XP3 938 aaKnown RBP eCLIP5.07□□□□□ -1.6
CLK3-219ENST00000567805 ZC3H3Q8IXZ2 948 aaKnown RBP5.07□□□□□ -1.6
CLK3-219ENST00000567805 TTC39CQ8N584 583 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 C12orf29Q8N999 325 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 SUMF1Q8NBK3 374 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 FBXL13Q8NEE6 735 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 TTC16Q8NEE8 873 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 SLC2A14Q8TDB8 520 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 RUBCNQ92622 972 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 SECISBP2LQ93073 1101 aaKnown RBP5.07□□□□□ -1.6
CLK3-219ENST00000567805 FBXO32Q969P5 355 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 ELMO3Q96BJ8 720 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 CHFRQ96EP1 664 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 EEF2KMTQ96G04 330 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 KCNK16Q96T55 309 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 HNRNPABQ99729 332 aaKnown RBP5.07□□□□□ -1.6
CLK3-219ENST00000567805 HINFPQ9BQA5 517 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 NT5C1AQ9BXI3 368 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 NIF3L1Q9GZT8 377 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 RNF38Q9H0F5 515 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 KDM4CQ9H3R0 1056 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 FBXO44Q9H4M3 255 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 MMRN2Q9H8L6 949 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 ECT2Q9H8V3 914 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 APOBEC3GQ9HC16 384 aaKnown RBP5.07□□□□□ -1.6
CLK3-219ENST00000567805 PNPLA8Q9NP80 782 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 KRT82Q9NSB4 513 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 RBM12Q9NTZ6 932 aaKnown RBP5.07□□□□□ -1.6
CLK3-219ENST00000567805 IL37Q9NZH6 218 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 HMGXB4Q9UGU5 601 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 PCDHA5Q9Y5H7 936 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 CPQQ9Y646 472 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 WNT6Q9Y6F9 365 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 SPAG17Q6Q759 2223 aa5.07□□□□□ -1.6
CLK3-219ENST00000567805 FAM186AA6NE01 2351 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 PLXND1Q9Y4D7 1925 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 CCDC163A0A0D9SF12 145 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 E2F8A0AVK6 867 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 CHURC1-FNTBB4DL54 471 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 K7ESF4 209 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms