RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 ZEB2O60315 1214 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 DUSP11O75319 330 aaKnown RBP6.13□□□□□ -1.43
SF3B3-210ENST00000567654 SLITRK5O94991 958 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 TUBB4AP04350 444 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 MMEP08473 750 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 CLTAP09496 248 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 C6orf222P0C671 652 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-210ENST00000567654 STAG3L1P0CL83 205 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 HOXA11P31270 313 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-210ENST00000567654 USP8P40818 1118 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 CPT1AP50416 773 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 GALCP54803 685 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 MYL6P60660 151 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 NOP14P78316 857 aaKnown RBP6.13□□□□□ -1.43
SF3B3-210ENST00000567654 BIRC3Q13489 604 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 BMS1Q14692 1282 aaKnown RBP6.13□□□□□ -1.43
SF3B3-210ENST00000567654 ELF2Q15723 593 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 PTPROQ16827 1216 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 SLC10A6Q3KNW5 377 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 ALKBH5Q6P6C2 394 aaKnown RBP6.13□□□□□ -1.43
SF3B3-210ENST00000567654 CXCL17Q6UXB2 119 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 CPNE8Q86YQ8 564 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 WDR49Q8IV35 697 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 SLITRK4Q8IW52 837 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 FAM181AQ8N9Y4 354 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 FAM13CQ8NE31 585 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 CXorf38Q8TB03 319 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 MAP7D2Q96T17 732 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 EIF2AQ9BY44 585 aaKnown RBP6.13□□□□□ -1.43
SF3B3-210ENST00000567654 AP5M1Q9H0R1 490 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 SDCBP2Q9H190 292 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 CAPN10Q9HC96 672 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 PRDM10Q9NQV6 1147 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 SMARCAL1Q9NZC9 954 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 EHD2Q9NZN4 543 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 MYO1AQ9UBC5 1043 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 SIX4Q9UIU6 781 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 CDC23Q9UJX2 597 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 PPT2Q9UMR5 302 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 PACSIN2Q9UNF0 486 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-210ENST00000567654 EFR3BQ9Y2G0 817 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 INPP5FQ9Y2H2 1132 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 Q9Y3F1 56 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 NCANO14594 1321 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 GRIN2DO15399 1336 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 NRCAMQ92823 1304 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 KIAA1671Q9BY89 1806 aa6.13□□□□□ -1.43
SF3B3-210ENST00000567654 A0A1B0GUA9 196 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 CTAGE9A4FU28 777 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 PPEF2O14830 753 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 GSC2O15499 205 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 SEPT4O43236 478 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 ATP8B3O60423 1300 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 B4GALT4O60513 344 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 ZC3H11AO75152 810 aaKnown RBP eCLIP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 PALMO75781 387 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 IPO7O95373 1038 aaKnown RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 NPTXRO95502 500 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 FTCDO95954 541 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 ASS1P00966 412 aaKnown RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 MCF2P10911 925 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 CYP11B1P15538 503 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 ABCB4P21439 1286 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 TNFAIP3P21580 790 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 TMOD1P28289 359 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 SSTR4P31391 388 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 RAP1GAPP47736 663 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 MFAP3P55082 362 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 NKX3-2P78367 333 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 TFAMQ00059 246 aaKnown RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 SP3Q02447 781 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 GCNT1Q02742 428 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 CETN1Q12798 172 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 CUL2Q13617 745 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 SNX17Q15036 470 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 ERCC6LQ2NKX8 1250 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 UBXN11Q5T124 520 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 PAPD7Q5XG87 772 aaKnown RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 FBXW10Q5XX13 1052 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 JADE1Q6IE81 842 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 CCSAPQ6IQ19 270 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 OGFOD3Q6PK18 319 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 SCARA5Q6ZMJ2 495 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 RSRC2Q7L4I2 434 aaKnown RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 SRGAP1Q7Z6B7 1085 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 CDH24Q86UP0 819 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 ZNF410Q86VK4 478 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 MCATQ8IVS2 390 aaKnown RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 KCT2Q8NC54 265 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 KLHDC9Q8NEP7 349 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 COG1Q8WTW3 980 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 ANKRD7Q92527 254 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 ERO1AQ96HE7 468 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 CAPZA3Q96KX2 299 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 ALPK3Q96L96 1907 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 ZMAT2Q96NC0 199 aaKnown RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 SCLT1Q96NL6 688 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 PSMB7Q99436 277 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 ZSWIM1Q9BR11 485 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 MTG1Q9BT17 334 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms