RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 DHCR24Q15392 516 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 SNX30Q5VWJ9 437 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 TRMT11Q7Z4G4 463 aaKnown RBP19.73■□□□□ 0.75
LINC01238-205ENST00000567549 KBTBD6Q86V97 674 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 ADGRG2Q8IZP9 1017 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 USP33Q8TEY7 942 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 SPACA7Q96KW9 195 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 LINC00597Q9H2U6 94 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 DPEP3Q9H4B8 488 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 DMAC2Q9NW81 257 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 SMPD4Q9NXE4 827 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 MMP17Q9ULZ9 603 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 MYH10P35580 1976 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 ZBTB24O43167 697 aaPredicted RBP19.72■□□□□ 0.75
LINC01238-205ENST00000567549 ACTN4O43707 911 aaKnown RBP19.72■□□□□ 0.75
LINC01238-205ENST00000567549 AP1G2O75843 785 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 C4BPAP04003 597 aaKnown RBP19.72■□□□□ 0.75
LINC01238-205ENST00000567549 CYP17A1P05093 508 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 ADH5P11766 374 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 KRT13P13646 458 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 CASP1P29466 404 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 PIK3CAP42336 1068 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 DPP6P42658 865 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 MAPK8IP2Q13387 824 aaPredicted RBP19.72■□□□□ 0.75
LINC01238-205ENST00000567549 PLK5Q496M5 336 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 KMT5BQ4FZB7 885 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 PPM1JQ5JR12 505 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 EOGTQ5NDL2 527 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 CEP135Q66GS9 1140 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 INTS8Q75QN2 995 aaKnown RBP19.72■□□□□ 0.75
LINC01238-205ENST00000567549 TTC39CQ8N584 583 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 KCNV2Q8TDN2 545 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 RNF38Q9H0F5 515 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 SMYD3Q9H7B4 428 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 TLR8Q9NR97 1041 aaKnown RBP19.72■□□□□ 0.75
LINC01238-205ENST00000567549 KRT82Q9NSB4 513 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 KIAA1549LQ6ZVL6 1849 aa19.72■□□□□ 0.75
LINC01238-205ENST00000567549 CLDN5O00501 218 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 PFKFB1P16118 471 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 OPRD1P41143 372 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 GRIA2P42262 883 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 SYKP43405 635 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 TNFRSF4P43489 277 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 SLC5A3P53794 718 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 STK4Q13043 487 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 ZACNQ401N2 412 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 C2orf27AQ580R0 203 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 SCARA5Q6ZMJ2 495 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 TADA2BQ86TJ2 420 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 CNOT6LQ96LI5 555 aaKnown RBP19.71■□□□□ 0.75
LINC01238-205ENST00000567549 SCAND2PQ9GZW5 306 aaPredicted RBP19.71■□□□□ 0.75
LINC01238-205ENST00000567549 LSM7Q9UK45 103 aaKnown RBP19.71■□□□□ 0.75
LINC01238-205ENST00000567549 TRAF3IP3Q9Y228 551 aa19.71■□□□□ 0.75
LINC01238-205ENST00000567549 KLRC4O43908 158 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 KAT7O95251 611 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 ADRB1P08588 477 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 CASP4P49662 377 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 SEC13P55735 322 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 GRAMD1CQ8IYS0 662 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 CRYBG2Q8N1P7 616 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 KIAA0895Q8NCT3 520 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 WHAMMQ8TF30 809 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 KCTD10Q9H3F6 313 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 CYP3A43Q9HB55 503 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.7■□□□□ 0.74
LINC01238-205ENST00000567549 ARHGEF4Q9NR80 690 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 IL37Q9NZH6 218 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 MYO16Q9Y6X6 1858 aa19.7■□□□□ 0.74
LINC01238-205ENST00000567549 COCHO43405 550 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 STX10O60499 249 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 FAM200BP0CF97 657 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 VAMP7P51809 220 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 CDH8P55286 799 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 BECN1Q14457 450 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 CRY1Q16526 586 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 NFIL3Q16649 462 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 PLA2G2CQ5R387 149 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 SV2AQ7L0J3 742 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 ACOT1Q86TX2 421 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 RASSF3Q86WH2 238 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 FAXDC2Q96IV6 333 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 KCNK16Q96T55 309 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 GZF1Q9H116 711 aaPredicted RBP19.69■□□□□ 0.74
LINC01238-205ENST00000567549 DUSP15Q9H1R2 295 aaPredicted RBP19.69■□□□□ 0.74
LINC01238-205ENST00000567549 CSNK1G1Q9HCP0 422 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 PNPLA8Q9NP80 782 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 DEC1Q9P2X7 70 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 PCDHA5Q9Y5H7 936 aa19.69■□□□□ 0.74
LINC01238-205ENST00000567549 SDK1Q7Z5N4 2213 aa19.68■□□□□ 0.74
LINC01238-205ENST00000567549 EML5Q05BV3 1969 aa19.68■□□□□ 0.74
LINC01238-205ENST00000567549 A0A1B0GVL5 298 aa19.68■□□□□ 0.74
LINC01238-205ENST00000567549 FAM92AA1XBS5 289 aa19.68■□□□□ 0.74
LINC01238-205ENST00000567549 K7EQS6 105 aa19.68■□□□□ 0.74
LINC01238-205ENST00000567549 RHOBTB3O94955 611 aa19.68■□□□□ 0.74
LINC01238-205ENST00000567549 CAVIN2O95810 425 aa19.68■□□□□ 0.74
LINC01238-205ENST00000567549 ASS1P00966 412 aaKnown RBP19.68■□□□□ 0.74
LINC01238-205ENST00000567549 NR2F2P24468 414 aa19.68■□□□□ 0.74
LINC01238-205ENST00000567549 PSEN1P49768 467 aa19.68■□□□□ 0.74
LINC01238-205ENST00000567549 CACNA2D1P54289 1103 aa19.68■□□□□ 0.74
LINC01238-205ENST00000567549 CREB5Q02930 508 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms