RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 PARD3BQ8TEW8 1205 aa11.03□□□□□ -0.64
LINC00564-201ENST00000567258 LRRC3BQ96PB8 259 aa11.03□□□□□ -0.64
LINC00564-201ENST00000567258 CYP2S1Q96SQ9 504 aa11.03□□□□□ -0.64
LINC00564-201ENST00000567258 RBM12Q9NTZ6 932 aaKnown RBP11.03□□□□□ -0.64
LINC00564-201ENST00000567258 SMG5Q9UPR3 1016 aaKnown RBP11.03□□□□□ -0.64
LINC00564-201ENST00000567258 CCL26Q9Y258 94 aa11.03□□□□□ -0.64
LINC00564-201ENST00000567258 ZNF292O60281 2723 aa11.02□□□□□ -0.64
LINC00564-201ENST00000567258 MYOFQ9NZM1 2061 aa11.02□□□□□ -0.64
LINC00564-201ENST00000567258 SHISA7A6NL88 538 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 LRRIQ3A6PVS8 624 aaPredicted RBP11.02□□□□□ -0.65
LINC00564-201ENST00000567258 F8VP50 259 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 IKBKBO14920 756 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 KLRC4O43908 158 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 RTN3O95197 1032 aaPredicted RBP11.02□□□□□ -0.65
LINC00564-201ENST00000567258 CNR2P34972 360 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 PIK3CAP42336 1068 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 CASP4P49662 377 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 NDUFA8P51970 172 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 SH3BP2P78314 561 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 NOP14P78316 857 aaKnown RBP11.02□□□□□ -0.65
LINC00564-201ENST00000567258 FOXK2Q01167 660 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 SATB1Q01826 763 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 CCDC142Q17RM4 750 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 TRIM68Q6AZZ1 485 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 TXNDC11Q6PKC3 985 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 SCARA5Q6ZMJ2 495 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 RETREG3Q86VR2 466 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 SUMF1Q8NBK3 374 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 B3GALNT2Q8NCR0 500 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 KIAA0895Q8NCT3 520 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 PDZD8Q8NEN9 1154 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 OSCP1Q8WVF1 389 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 TAF4BQ92750 862 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 C8orf48Q96LL4 319 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 FAM83CQ9BQN1 747 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 EPC1Q9H2F5 836 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 SLC8A2Q9UPR5 921 aa11.02□□□□□ -0.65
LINC00564-201ENST00000567258 A0A1W2PQ27 194 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 A0A1W2PQ64 194 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 A0A1W2PQD8 194 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 C2orf78A6NCI8 922 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 SLC9A3R1O14745 358 aaPredicted RBP11.01□□□□□ -0.65
LINC00564-201ENST00000567258 LILRB5O75023 590 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 RHOBTB3O94955 611 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 NFATC1O95644 943 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 DRD1P21728 446 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 SDHBP21912 280 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 VAMP7P51809 220 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 SIM2Q14190 667 aaPredicted RBP11.01□□□□□ -0.65
LINC00564-201ENST00000567258 FBXO43Q4G163 708 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 HEATR6Q6AI08 1181 aaKnown RBP11.01□□□□□ -0.65
LINC00564-201ENST00000567258 KRBA2Q6ZNG9 492 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 INTS8Q75QN2 995 aaKnown RBP11.01□□□□□ -0.65
LINC00564-201ENST00000567258 CEP68Q76N32 757 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 LONP2Q86WA8 852 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 DDX42Q86XP3 938 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC00564-201ENST00000567258 NUP93Q8N1F7 819 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 SH3RF2Q8TEC5 729 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 NELL1Q92832 810 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 SMARCD1Q96GM5 515 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 P2RY13Q9BPV8 354 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 NACA2Q9H009 215 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 KCTD10Q9H3F6 313 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 DPEP3Q9H4B8 488 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 ECT2Q9H8V3 914 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 VRTNQ9H8Y1 702 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 DMAC2Q9NW81 257 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 HOOK1Q9UJC3 728 aaKnown RBP11.01□□□□□ -0.65
LINC00564-201ENST00000567258 HPSEQ9Y251 543 aa11.01□□□□□ -0.65
LINC00564-201ENST00000567258 GVINP1Q7Z2Y8 2422 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 OTOGLQ3ZCN5 2332 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 CHURC1-FNTBB4DL54 471 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 CLDN5O00501 218 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 TRDMT1O14717 391 aaKnown RBP11□□□□□ -0.65
LINC00564-201ENST00000567258 MAPK13O15264 365 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 TADA3O75528 432 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 ZNF202O95125 648 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 C4BPAP04003 597 aaKnown RBP11□□□□□ -0.65
LINC00564-201ENST00000567258 MBL2P11226 248 aaPredicted RBP11□□□□□ -0.65
LINC00564-201ENST00000567258 ARSAP15289 507 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 NR2F2P24468 414 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 YWHAQP27348 245 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 PSMC2P35998 433 aaKnown RBP11□□□□□ -0.65
LINC00564-201ENST00000567258 FNTBP49356 437 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 CDH8P55286 799 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 CLDN10P78369 228 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 TAF10Q12962 218 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 CCINQ13939 588 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 ZNF77Q15935 545 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 TMEM196Q5HYL7 178 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 LAIR1Q6GTX8 287 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 Q6ZS52 159 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 ERMP1Q7Z2K6 904 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11□□□□□ -0.65
LINC00564-201ENST00000567258 DCLK2Q8N568 766 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 TMEM174Q8WUU8 243 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 OVCA2Q8WZ82 227 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 CD101Q93033 1021 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 FBXO32Q969P5 355 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 SLC22A12Q96S37 553 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms