RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 MAGI2Q86UL8 1455 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 DISP3Q9P2K9 1392 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 TBKBP1A7MCY6 615 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 HOXA3O43365 443 aaPredicted RBP6.5□□□□□ -1.37
KARS-208ENST00000566772 RGS10O43665 173 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 TAF5LO75529 589 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 PRSS23O95084 383 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 LMNAP02545 664 aaKnown RBP6.5□□□□□ -1.37
KARS-208ENST00000566772 CHRM3P20309 590 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 ABCD3P28288 659 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 CSF2RBP32927 897 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 NPTX2P47972 431 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 CCT4P50991 539 aaKnown RBP6.5□□□□□ -1.37
KARS-208ENST00000566772 RBM5P52756 815 aaKnown RBP eCLIP6.5□□□□□ -1.37
KARS-208ENST00000566772 EPHB3P54753 998 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 KRT17Q04695 432 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 GPS1Q13098 491 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 USP10Q14694 798 aaKnown RBP6.5□□□□□ -1.37
KARS-208ENST00000566772 ANKRD1Q15327 319 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 PTCHD3Q3KNS1 767 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 MGAT5BQ3V5L5 792 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 MED25Q71SY5 747 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 B4GALNT4Q76KP1 1039 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 R3HCC1LQ7Z5L2 792 aaKnown RBP6.5□□□□□ -1.37
KARS-208ENST00000566772 REXO1L1PQ8IX06 675 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 BPIFB1Q8TDL5 484 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 FNIP1Q8TF40 1166 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 SPATA25Q9BR10 227 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 TLR10Q9BXR5 811 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 EPC1Q9H2F5 836 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 IL23AQ9NPF7 189 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 TBC1D29Q9UFV1 150 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 CNTN6Q9UQ52 1028 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 C9orf84Q5VXU9 1444 aa6.5□□□□□ -1.37
KARS-208ENST00000566772 ATP10AO60312 1499 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 MYOCOSA0A1B0GUC4 107 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 UBE2QL1A1L167 161 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 B5MCH6 92 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 ZSCAN9O15535 394 aaPredicted RBP6.49□□□□□ -1.37
KARS-208ENST00000566772 DHHO43323 396 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 TMEM63AO94886 807 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 WNT11O96014 354 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
KARS-208ENST00000566772 GLI1P08151 1106 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 CSF1P09603 554 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 MYCLP12524 364 aaPredicted RBP6.49□□□□□ -1.37
KARS-208ENST00000566772 AKR1B1P15121 316 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 MAPK4P31152 587 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 GALNSP34059 522 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 CCR9P51686 369 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 LILRA4P59901 499 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 GALNT2Q10471 571 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 GALNTL6Q49A17 601 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 ZMYM1Q5SVZ6 1142 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 CFAP58Q5T655 872 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 ATXN7L2Q5T6C5 722 aaPredicted RBP6.49□□□□□ -1.37
KARS-208ENST00000566772 MFSD4BQ5TF39 518 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 TMCO3Q6UWJ1 677 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 SLC30A10Q6XR72 485 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 NSUN7Q8NE18 718 aaKnown RBP6.49□□□□□ -1.37
KARS-208ENST00000566772 KCNG4Q8TDN1 519 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 TBC1D22AQ8WUA7 517 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 WDR60Q8WVS4 1066 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 STAMQ92783 540 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 PPP2R3CQ969Q6 453 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 YTHDC1Q96MU7 727 aaKnown RBP6.49□□□□□ -1.37
KARS-208ENST00000566772 TIGD1Q96MW7 591 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 GPR20Q99678 358 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 AP1M1Q9BXS5 423 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 CCDC68Q9H2F9 335 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 HAUS2Q9NVX0 235 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 ETAA1Q9NY74 926 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 HSF4Q9ULV5 492 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 SHOC2Q9UQ13 582 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 ARHGEF12Q9NZN5 1544 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 UHRF1BP1Q6BDS2 1440 aa6.49□□□□□ -1.37
KARS-208ENST00000566772 ZNF518AQ6AHZ1 1483 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 VWA3AA6NCI4 1184 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 EFCAB8A8MWE9 144 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 KIF28PB7ZC32 967 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 POLRMTO00411 1230 aaKnown RBP6.48□□□□□ -1.37
KARS-208ENST00000566772 KLK10O43240 276 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 PTP4A3O75365 173 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 ITGB1P05556 798 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 CPA1P15085 419 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 SERPINA4P29622 427 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 STAT1P42224 750 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 MAGEA10P43363 369 aaPredicted RBP6.48□□□□□ -1.37
KARS-208ENST00000566772 ZNF134P52741 427 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 DLG4P78352 724 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 PDCLQ13371 301 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 FHL3Q13643 280 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 CSRP2Q16527 193 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 NOMO2Q5JPE7 1267 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 CFAP52Q8N1V2 620 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 RNF169Q8NCN4 708 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 CPT1BQ92523 772 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 RABGGTAQ92696 567 aa6.48□□□□□ -1.37
KARS-208ENST00000566772 NELL1Q92832 810 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms