RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ZNF202O95125 648 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 KIF20AO95235 890 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 TRIM49P0CI25 452 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 TRIM49CP0CI26 452 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 MBL2P11226 248 aaPredicted RBP19.43■□□□□ 0.7
USB1-213ENST00000566292 NDST1P52848 882 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 ADGRG2Q8IZP9 1017 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 CRYBG2Q8N1P7 616 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 GUF1Q8N442 669 aaKnown RBP19.43■□□□□ 0.7
USB1-213ENST00000566292 KIAA1958Q8N8K9 716 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 PDZD8Q8NEN9 1154 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 ZFRQ96KR1 1074 aaKnown RBP19.43■□□□□ 0.7
USB1-213ENST00000566292 HHIPQ96QV1 700 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 CFAP97Q9P2B7 532 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 CHORDC1Q9UHD1 332 aaPredicted RBP19.43■□□□□ 0.7
USB1-213ENST00000566292 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.43■□□□□ 0.7
USB1-213ENST00000566292 MED19A0JLT2 244 aaPredicted RBP19.42■□□□□ 0.7
USB1-213ENST00000566292 FAM92AA1XBS5 289 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 ANTXRLA6NF34 631 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 PRR5-ARHGAP8B1AHC4 643 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 COCHO43405 550 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 LRP3O75074 770 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 GCLMP48507 274 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 ARHGAP8P85298 464 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 PPP3CAQ08209 521 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 ZCWPW2Q504Y3 356 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 SNX30Q5VWJ9 437 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 SYT13Q7L8C5 426 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 UNC93AQ86WB7 457 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 CAMKK1Q8N5S9 505 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 C12orf29Q8N999 325 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 SLC2A14Q8TDB8 520 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 GAB3Q8WWW8 586 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 TWNKQ96RR1 684 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 APOBEC3GQ9HC16 384 aaKnown RBP19.42■□□□□ 0.7
USB1-213ENST00000566292 SEMA4GQ9NTN9 838 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 FAM49BQ9NUQ9 324 aa19.42■□□□□ 0.7
USB1-213ENST00000566292 RPP40O75818 363 aaKnown RBP19.41■□□□□ 0.7
USB1-213ENST00000566292 ZDHHC11BP0C7U3 371 aa19.41■□□□□ 0.7
USB1-213ENST00000566292 ATXN1P54253 815 aaKnown RBP19.41■□□□□ 0.7
USB1-213ENST00000566292 DHCR24Q15392 516 aa19.41■□□□□ 0.7
USB1-213ENST00000566292 INTS8Q75QN2 995 aaKnown RBP19.41■□□□□ 0.7
USB1-213ENST00000566292 FAM186BQ8IYM0 893 aa19.41■□□□□ 0.7
USB1-213ENST00000566292 TAS1R2Q8TE23 839 aa19.41■□□□□ 0.7
USB1-213ENST00000566292 CCSER2Q9H7U1 834 aa19.41■□□□□ 0.7
USB1-213ENST00000566292 CSNK1G1Q9HCP0 422 aa19.41■□□□□ 0.7
USB1-213ENST00000566292 GMIPQ9P107 970 aa19.41■□□□□ 0.7
USB1-213ENST00000566292 SPTBN2O15020 2390 aa19.41■□□□□ 0.7
USB1-213ENST00000566292 NCOR2Q9Y618 2525 aa19.41■□□□□ 0.7
USB1-213ENST00000566292 K7EQS6 105 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 SLC9A3R1O14745 358 aaPredicted RBP19.4■□□□□ 0.7
USB1-213ENST00000566292 PGFP49763 221 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 MAP3K7CLP57077 242 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 INCA1Q0VD86 236 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 MESP2Q0VG99 397 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 ADAM9Q13443 819 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 DMC1Q14565 340 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 HECTD3Q5T447 861 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 RHBDF2Q6PJF5 856 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 KBTBD6Q86V97 674 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 DDX42Q86XP3 938 aaKnown RBP eCLIP19.4■□□□□ 0.7
USB1-213ENST00000566292 SMYD4Q8IYR2 804 aaPredicted RBP19.4■□□□□ 0.7
USB1-213ENST00000566292 USP33Q8TEY7 942 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 ACDQ96AP0 544 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 MMRN2Q9H8L6 949 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 COMMD8Q9NX08 183 aa19.4■□□□□ 0.7
USB1-213ENST00000566292 CDV3Q9UKY7 258 aaKnown RBP19.4■□□□□ 0.7
USB1-213ENST00000566292 MYO18AQ92614 2054 aaKnown RBP19.4■□□□□ 0.7
USB1-213ENST00000566292 AXIN1O15169 862 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 KRT13P13646 458 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 SDHBP21912 280 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 RPL13P26373 211 aaKnown RBP19.39■□□□□ 0.69
USB1-213ENST00000566292 ADORA2BP29275 332 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 PSMC2P35998 433 aaKnown RBP19.39■□□□□ 0.69
USB1-213ENST00000566292 SLC6A11P48066 632 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 TUBP50607 506 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 SEC13P55735 322 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 MCCD1P59942 119 aaPredicted RBP19.39■□□□□ 0.69
USB1-213ENST00000566292 ENPEPQ07075 957 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 CSRP2Q16527 193 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 PRR23CQ6ZRP0 262 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 CACNA2D4Q7Z3S7 1137 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 C12orf40Q86WS4 652 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 SFTPA1Q8IWL2 248 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 WHAMMQ8TF30 809 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 WBP2Q969T9 261 aa19.39■□□□□ 0.69
USB1-213ENST00000566292 E2F8A0AVK6 867 aa19.38■□□□□ 0.69
USB1-213ENST00000566292 CCDC192P0DO97 292 aa19.38■□□□□ 0.69
USB1-213ENST00000566292 PNOCQ13519 176 aa19.38■□□□□ 0.69
USB1-213ENST00000566292 C2orf27AQ580R0 203 aa19.38■□□□□ 0.69
USB1-213ENST00000566292 CLEC20AQ6ZU45 233 aa19.38■□□□□ 0.69
USB1-213ENST00000566292 GPRIN1Q7Z2K8 1008 aa19.38■□□□□ 0.69
USB1-213ENST00000566292 EEF2KMTQ96G04 330 aa19.38■□□□□ 0.69
USB1-213ENST00000566292 HNRNPABQ99729 332 aaKnown RBP19.38■□□□□ 0.69
USB1-213ENST00000566292 IMPG2Q9BZV3 1241 aa19.38■□□□□ 0.69
USB1-213ENST00000566292 NIF3L1Q9GZT8 377 aa19.38■□□□□ 0.69
USB1-213ENST00000566292 CYP3A43Q9HB55 503 aa19.38■□□□□ 0.69
USB1-213ENST00000566292 TMEM8AQ9HCN3 771 aa19.38■□□□□ 0.69
USB1-213ENST00000566292 ABCA7Q8IZY2 2146 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 HHLA1C9JL84 531 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms