RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 A0A1W2PRG0 241 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 MEIS1O00470 390 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 IRS4O14654 1257 aaPredicted RBP3.03□□□□□ -1.93
CHD9-218ENST00000566029 SLC16A3O15427 465 aaKnown RBP3.03□□□□□ -1.93
CHD9-218ENST00000566029 SEC24DO94855 1032 aaPredicted RBP3.03□□□□□ -1.93
CHD9-218ENST00000566029 ADSLP30566 484 aaPredicted RBP3.03□□□□□ -1.93
CHD9-218ENST00000566029 CTBSQ01459 385 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 SELENBP1Q13228 472 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 MMEL1Q495T6 779 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 PPP2R2DQ66LE6 453 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 BLIDQ8IZY5 108 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 LILRB4Q8NHJ6 448 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 CAPSLQ8WWF8 208 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 POMGNT1Q8WZA1 660 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 TRIM8Q9BZR9 551 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 KLHL4Q9C0H6 718 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 RPAP3Q9H6T3 665 aaPredicted RBP3.03□□□□□ -1.93
CHD9-218ENST00000566029 CUEDC1Q9NWM3 386 aaPredicted RBP3.03□□□□□ -1.93
CHD9-218ENST00000566029 WARS2Q9UGM6 360 aaKnown RBP3.03□□□□□ -1.93
CHD9-218ENST00000566029 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.03□□□□□ -1.93
CHD9-218ENST00000566029 SF3B1O75533 1304 aaKnown RBP eCLIP3.02□□□□□ -1.935e-6■■■■■ 77.9
CHD9-218ENST00000566029 PARP4Q9UKK3 1724 aaKnown RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 LDHBP07195 334 aaKnown RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 LRPAP1P30533 357 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 RHBDL3P58872 404 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 KCNJ8Q15842 424 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 PKN2Q16513 984 aaKnown RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 SNX32Q86XE0 403 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 CPSF7Q8N684 471 aaKnown RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 ANAPC16Q96DE5 110 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 DCUN1D1Q96GG9 259 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 C7orf26Q96N11 449 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 OLFM1Q99784 485 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 DNAJC5Q9H3Z4 198 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 TYW1Q9NV66 732 aaKnown RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 HOXC10Q9NYD6 342 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 SLC24A2Q9UI40 661 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 ERVK-11Q9UQG0 969 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 ATP11BQ9Y2G3 1177 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 COPG1Q9Y678 874 aaKnown RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 ZNF536O15090 1300 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 ARPC4-TTLL3A0A0A6YYG9 625 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 CLASP2O75122 1294 aaKnown RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 C8BP07358 591 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 FAM58BPP0C7Q3 252 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 KITLGP21583 273 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 PEX3P56589 373 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 YWHAEP62258 255 aaKnown RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 CACNB1Q02641 598 aaPredicted RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 ATP1A4Q13733 1029 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 OXA1LQ15070 435 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 KAZNQ674X7 775 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 IYDQ6PHW0 289 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 KLHL24Q6TFL4 600 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 CCDC81Q6ZN84 652 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 KRT25Q7Z3Z0 450 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 HAUS6Q7Z4H7 955 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 SYCE1Q8N0S2 351 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 LCORLQ8N3X6 602 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 AFAP1L2Q8N4X5 818 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 JADE3Q92613 823 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 GLG1Q92896 1179 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 CEP95Q96GE4 821 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 PHF12Q96QT6 1004 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 CDH19Q9H159 772 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 HEY2Q9UBP5 337 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 TYW5A2RUC4 315 aaKnown RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 ZNF701M0R085 212 aaPredicted RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 XPOTO43592 962 aaKnown RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 FARP2O94887 1054 aaPredicted RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 ESRRBO95718 433 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 OCM2P0CE71 109 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 OCMP0CE72 109 aaPredicted RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 JUNDP17535 347 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 MZF1P28698 734 aaPredicted RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 STAT1P42224 750 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 CAV1Q03135 178 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 COL9A2Q14055 689 aaPredicted RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 DDX60LQ5H9U9 1706 aaKnown RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 MDH1BQ5I0G3 518 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 CCDC149Q6ZUS6 474 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 CACTIN-AS1Q8N1I8 211 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 MTURNQ8N3F0 131 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 ZNF496Q96IT1 587 aaPredicted RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 ZNF512BQ96KM6 892 aaPredicted RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 VTA1Q9NP79 307 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 SLC38A7Q9NVC3 462 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 RWDD3Q9Y3V2 267 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 MEGF6O75095 1541 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 A0A1B0GTW7 788 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 A0A1W2PPM1 405 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 UNCXA6NJT0 531 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 GNPATO15228 680 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 DDAH1O94760 285 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 ATF7P17544 494 aaPredicted RBP3.02□□□□□ -1.93
CHD9-218ENST00000566029 CNGA3Q16281 694 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 PARP10Q53GL7 1025 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 SCARA3Q6AZY7 606 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 SIGIRRQ6IA17 410 aa3.02□□□□□ -1.93
CHD9-218ENST00000566029 ANKRD13DQ6ZTN6 518 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms