RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 NEK11Q8NG66 645 aa22.21■■□□□ 1.15
SHCBP1-205ENST00000566016 EDAQ92838 391 aa22.21■■□□□ 1.15
SHCBP1-205ENST00000566016 KXD1Q9BQD3 176 aa22.21■■□□□ 1.15
SHCBP1-205ENST00000566016 EPHB6O15197 1021 aa22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 THAP12O43422 761 aa22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 PRAMEF12O95522 483 aa22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 CLCN1P35523 988 aa22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 JAM2P57087 298 aa22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 POLR2FP61218 127 aaKnown RBP22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 RPP25Q9BUL9 199 aaKnown RBP22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 ACP6Q9NPH0 428 aa22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 SLC2A4RGQ9NR83 387 aa22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 TLR8Q9NR97 1041 aaKnown RBP22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 GMIPQ9P107 970 aa22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 PCDHGC3Q9UN70 934 aa22.2■■□□□ 1.14
SHCBP1-205ENST00000566016 C2orf78A6NCI8 922 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 TEX33O43247 280 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 CALCAP01258 141 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 CKMP06732 381 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 USP17L7P0C7H9 530 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 PSMC3P17980 439 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 PSEN1P49768 467 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 FANCCQ00597 558 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 FCHO2Q0JRZ9 810 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 VITQ6UXI7 678 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 MFSD6LQ8IWD5 586 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 SCML4Q8N228 414 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 CELF5Q8N6W0 485 aaKnown RBP22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 UBA3Q8TBC4 463 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 STK32AQ8WU08 396 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 SECISBP2LQ93073 1101 aaKnown RBP22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 HSFY1Q96LI6 401 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 PCMTD1Q96MG8 357 aaPredicted RBP22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 TRPC7Q9HCX4 862 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 TDP1Q9NUW8 608 aa22.19■■□□□ 1.14
SHCBP1-205ENST00000566016 COL4A2P08572 1712 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 ZDBF2Q9HCK1 2354 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 F5P12259 2224 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 HEPACAM2A8MVW5 462 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 TULP2O00295 520 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 PNMA6AP0CW24 399 aaPredicted RBP22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 TCF3P15923 654 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 VIPR2P41587 438 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 GPD2P43304 727 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 RPL34P49207 117 aaKnown RBP22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 NR1I3Q14994 352 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 PM20D1Q6GTS8 502 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 SLC47A2Q86VL8 602 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 USP13Q92995 863 aaPredicted RBP22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 NAP1L5Q96NT1 182 aaPredicted RBP22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 SPAG5Q96R06 1193 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 LRRC4Q9HBW1 653 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 CYLDQ9NQC7 956 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 ARHGAP26Q9UNA1 814 aa22.18■■□□□ 1.14
SHCBP1-205ENST00000566016 HDCP19113 662 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 TKTL1P51854 596 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 SLC7A9P82251 487 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 SIGLEC14Q08ET2 396 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 HECTD3Q5T447 861 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 PMF1Q6P1K2 205 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 ZNF276Q8N554 614 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 RSPRY1Q96DX4 576 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 SLC22A12Q96S37 553 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 PLA2G2FQ9BZM2 168 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 CNGB3Q9NQW8 809 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 CLIC5Q9NZA1 410 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 CHORDC1Q9UHD1 332 aaPredicted RBP22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 TICRRQ7Z2Z1 1910 aa22.17■■□□□ 1.14
SHCBP1-205ENST00000566016 DPYSL4O14531 572 aa22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 ZBED1O96006 694 aa22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 CYP11B1P15538 503 aa22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 SOX5P35711 763 aa22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 ADIGQ0VDE8 80 aa22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 KLHDC10Q6PID8 442 aa22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 ARHGAP18Q8N392 663 aa22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 KIAA1958Q8N8K9 716 aa22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 ARL14EPQ8N8R7 260 aaPredicted RBP22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 ST13P5Q8NFI4 369 aaPredicted RBP22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 TRMT61BQ9BVS5 477 aaKnown RBP22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 LHX5Q9H2C1 402 aa22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 NLRC4Q9NPP4 1024 aa22.16■■□□□ 1.14
SHCBP1-205ENST00000566016 NARSO43776 548 aaKnown RBP22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 ABL1P00519 1130 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 UBASH3AP57075 661 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 PFKPQ01813 784 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 FMNL3Q8IVF7 1028 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 SIX6OS1Q8N1H7 587 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 BPIFB1Q8TDL5 484 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 EPS8L1Q8TE68 723 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 CYP2S1Q96SQ9 504 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 SMOC2Q9H3U7 446 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 TRPV5Q9NQA5 729 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 MYO6Q9UM54 1294 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 CCL26Q9Y258 94 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 COCHO43405 550 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 TLR5O60602 858 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 KRT9P35527 623 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 STAT1P42224 750 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 ACADSBP45954 432 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 USP4Q13107 963 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms