RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 SPATA4Q8NEY3 305 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 SUSD6Q92537 303 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 TMA16Q96EY4 203 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 RBM15Q96T37 977 aaKnown RBP eCLIP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 GAD1Q99259 594 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CARD9Q9H257 536 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 ECT2Q9H8V3 914 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 ACTR5Q9H9F9 607 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 DDX20Q9UHI6 824 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 SUPT3HB4E1H0 165 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 FOXN3O00409 490 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CAPN15O75808 1086 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 SGPL1O95470 568 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 RPN2P04844 631 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 MMEP08473 750 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CHKAP35790 457 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 INPP1P49441 399 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 NDUFV1P49821 464 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CCL23P55773 120 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 YWHAZP63104 245 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 KRT72Q14CN4 511 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 FAM83EQ2M2I3 478 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 NLRP9Q7RTR0 991 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CCDC138Q96M89 665 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 ABCB6Q9NP58 842 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 PSMC3IPQ9P2W1 217 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 FZD1Q9UP38 647 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 MRPS23Q9Y3D9 190 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 TAF6LQ9Y6J9 622 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 SALL3Q9BXA9 1300 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 A0A0A6YYK5 440 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 NDUFS2O75306 463 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 PSMD10O75832 226 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 ASGR1P07306 291 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 PTPN3P26045 913 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 PPP3CCP48454 512 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 TOB1P50616 345 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CAMK2GQ13555 558 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 NBPF20Q3BBV1 942 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 FNDC3BQ53EP0 1204 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 HSP90AA5PQ58FG0 334 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 ERMARDQ5T6L9 678 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 SUGP1Q8IWZ8 645 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 TRAPPC12Q8WVT3 735 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 KLHL29Q96CT2 875 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CCDC126Q96EE4 140 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CLPBQ9H078 707 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 TSR3Q9UJK0 312 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 DNPEPQ9ULA0 475 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 USP18Q9UMW8 372 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 A0A0G2JND7 137 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 PRR23AA6NEV1 266 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 SEPT4O43236 478 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 LMNAP02545 664 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 MYL2P10916 166 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 VCPP55072 806 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 SMTNL2Q2TAL5 461 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 SPDYAQ5MJ70 313 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 TREML2Q5T2D2 321 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 TTC39BQ5VTQ0 682 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 LBX2Q6XYB7 198 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 MOB2Q70IA6 237 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CCDC60Q8IWA6 550 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 TAS1R2Q8TE23 839 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 BHMTQ93088 406 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 NEUROG2Q9H2A3 272 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 TSPAN16Q9UKR8 245 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 C2CD2Q9Y426 696 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CASZ1Q86V15 1759 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 A0A0G2JLL6 359 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 MAGEB16A2A368 324 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 ZNF839A8K0R7 811 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CBX4O00257 560 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 E2F6O75461 281 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 FGFR4P22455 802 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CDC25CP30307 473 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 RFC1P35251 1148 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 MAPK8P45983 427 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 RAP1GAPP47736 663 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CLNS1AP54105 237 aaKnown RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 PDCLQ13371 301 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 CLEC16AQ2KHT3 1053 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 HECTD3Q5T447 861 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 PTF1AQ7RTS3 328 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 PRRT2Q7Z6L0 340 aaPredicted RBP6.75□□□□□ -1.33
LINC01043-201ENST00000565936 LENG9Q96B70 501 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 NRBF2Q96F24 287 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 STAMBPL1Q96FJ0 436 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 NLNQ9BYT8 704 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 AMACRQ9UHK6 382 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 DNMT3LQ9UJW3 386 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 HPSEQ9Y251 543 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 NFAT5O94916 1531 aa6.75□□□□□ -1.33
LINC01043-201ENST00000565936 DIAPH2O60879 1101 aa6.74□□□□□ -1.33
LINC01043-201ENST00000565936 CDH16O75309 829 aa6.74□□□□□ -1.33
LINC01043-201ENST00000565936 PMPCBO75439 489 aa6.74□□□□□ -1.33
LINC01043-201ENST00000565936 MMP3P08254 477 aa6.74□□□□□ -1.33
LINC01043-201ENST00000565936 SERPINF2P08697 491 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms