RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 SYAP1Q96A49 352 aaPredicted RBP20.1■□□□□ 0.81
SPSB3-207ENST00000565550 B3GNT5Q9BYG0 378 aa20.1■□□□□ 0.81
SPSB3-207ENST00000565550 ELOVL4Q9GZR5 314 aa20.1■□□□□ 0.81
SPSB3-207ENST00000565550 SPTBN2O15020 2390 aa20.1■□□□□ 0.81
SPSB3-207ENST00000565550 EPN2O95208 641 aa20.09■□□□□ 0.81
SPSB3-207ENST00000565550 TRIM49P0CI25 452 aa20.09■□□□□ 0.81
SPSB3-207ENST00000565550 TRIM49CP0CI26 452 aa20.09■□□□□ 0.81
SPSB3-207ENST00000565550 CDH8P55286 799 aa20.09■□□□□ 0.81
SPSB3-207ENST00000565550 STX17P56962 302 aa20.09■□□□□ 0.81
SPSB3-207ENST00000565550 IFRD2Q12894 506 aaPredicted RBP20.09■□□□□ 0.81
SPSB3-207ENST00000565550 SF3A2Q15428 464 aaKnown RBP20.09■□□□□ 0.81
SPSB3-207ENST00000565550 B3GALNT2Q8NCR0 500 aa20.09■□□□□ 0.81
SPSB3-207ENST00000565550 TMEM174Q8WUU8 243 aa20.09■□□□□ 0.81
SPSB3-207ENST00000565550 NUP62CLQ9H1M0 184 aa20.09■□□□□ 0.81
SPSB3-207ENST00000565550 SMPD4Q9NXE4 827 aa20.09■□□□□ 0.81
SPSB3-207ENST00000565550 CPQQ9Y646 472 aa20.09■□□□□ 0.81
SPSB3-207ENST00000565550 ANAPC1Q9H1A4 1944 aa20.09■□□□□ 0.81
SPSB3-207ENST00000565550 APBB3O95704 486 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 OLFM2O95897 454 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 ZNF806P0C7X5 589 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 OPRD1P41143 372 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 BIRC3Q13489 604 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 GAB4Q2WGN9 574 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 EDRF1Q3B7T1 1238 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 AASDHQ4L235 1098 aaPredicted RBP20.08■□□□□ 0.81
SPSB3-207ENST00000565550 PPM1JQ5JR12 505 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 FILIP1Q7Z7B0 1213 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 ADGRG2Q8IZP9 1017 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 NUP93Q8N1F7 819 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 NELFBQ8WX92 580 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 ACDQ96AP0 544 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 ZC3H10Q96K80 434 aaKnown RBP20.08■□□□□ 0.81
SPSB3-207ENST00000565550 SLITRK1Q96PX8 696 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 DUSP9Q99956 384 aaKnown RBP20.08■□□□□ 0.81
SPSB3-207ENST00000565550 SMYD3Q9H7B4 428 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 FRMD4BQ9Y2L6 1034 aa20.08■□□□□ 0.81
SPSB3-207ENST00000565550 GREB1Q4ZG55 1949 aa20.08■□□□□ 0.8
SPSB3-207ENST00000565550 ANTXRLA6NF34 631 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 K7EQS6 105 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 SCAMP3O14828 347 aaKnown RBP20.07■□□□□ 0.8
SPSB3-207ENST00000565550 OAS1P00973 400 aaKnown RBP20.07■□□□□ 0.8
SPSB3-207ENST00000565550 YWHAQP27348 245 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 SEC13P55735 322 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 PLK5Q496M5 336 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 FAM186BQ8IYM0 893 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 C12orf50Q8NA57 414 aaPredicted RBP20.07■□□□□ 0.8
SPSB3-207ENST00000565550 CCDC26Q8TAB7 109 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 CNTNAP3BQ96NU0 1288 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 KCNK16Q96T55 309 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 CNTNAP3Q9BZ76 1288 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 MMRN2Q9H8L6 949 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 VRTNQ9H8Y1 702 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 RXFP3Q9NSD7 469 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 EBF1Q9UH73 591 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 RALGAPA1Q6GYQ0 2036 aa20.07■□□□□ 0.8
SPSB3-207ENST00000565550 DCLK1O15075 740 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 CLSTN1O94985 981 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 VNN1O95497 513 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 C4BPAP04003 597 aaKnown RBP20.06■□□□□ 0.8
SPSB3-207ENST00000565550 CYP17A1P05093 508 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 MBL2P11226 248 aaPredicted RBP20.06■□□□□ 0.8
SPSB3-207ENST00000565550 VAMP7P51809 220 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 AP3M2P53677 418 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 CLDN10P78369 228 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 NCOA4Q13772 614 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 DHCR24Q15392 516 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 ZNF699Q32M78 642 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 C2orf27AQ580R0 203 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 ZNF667Q5HYK9 610 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 PAQR9Q6ZVX9 377 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 ZC3H3Q8IXZ2 948 aaKnown RBP20.06■□□□□ 0.8
SPSB3-207ENST00000565550 KIAA1958Q8N8K9 716 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 USP33Q8TEY7 942 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 TSG101Q99816 390 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 DUSP15Q9H1R2 295 aaPredicted RBP20.06■□□□□ 0.8
SPSB3-207ENST00000565550 SMOC1Q9H4F8 434 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.06■□□□□ 0.81e-7■■■■■ 247.2
SPSB3-207ENST00000565550 CFAP97Q9P2B7 532 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 CHORDC1Q9UHD1 332 aaPredicted RBP20.06■□□□□ 0.8
SPSB3-207ENST00000565550 PCDHGA5Q9Y5G8 931 aa20.06■□□□□ 0.8
SPSB3-207ENST00000565550 GOLGA6L22H0YM25 854 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 SLC9A3R1O14745 358 aaPredicted RBP20.05■□□□□ 0.8
SPSB3-207ENST00000565550 PSMA7O14818 248 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 RTN3O95197 1032 aaPredicted RBP20.05■□□□□ 0.8
SPSB3-207ENST00000565550 ADRB1P08588 477 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 RPL13P26373 211 aaKnown RBP20.05■□□□□ 0.8
SPSB3-207ENST00000565550 PSMC2P35998 433 aaKnown RBP20.05■□□□□ 0.8
SPSB3-207ENST00000565550 SLC6A11P48066 632 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 DGKEP52429 567 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 PPP3CAQ08209 521 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 STIM1Q13586 685 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 PLA2G2CQ5R387 149 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 IL31Q6EBC2 164 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 TTI2Q6NXR4 508 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 SCARA5Q6ZMJ2 495 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 TSTD1Q8NFU3 115 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 SCAMP5Q8TAC9 235 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 FBXO32Q969P5 355 aa20.05■□□□□ 0.8
SPSB3-207ENST00000565550 DHTKD1Q96HY7 919 aaPredicted RBP20.05■□□□□ 0.8
SPSB3-207ENST00000565550 MED15Q96RN5 788 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms