RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	TWNK	Q96RR1	684 aa		12.35	□□□□□ -0.43
KIFC3-222	ENST00000565481	SMO	Q99835	787 aa		12.35	□□□□□ -0.43
KIFC3-222	ENST00000565481	DUSP9	Q99956	384 aa	Known RBP	12.35	□□□□□ -0.43
KIFC3-222	ENST00000565481	CYP3A43	Q9HB55	503 aa		12.35	□□□□□ -0.43
KIFC3-222	ENST00000565481	APOBEC3G	Q9HC16	384 aa	Known RBP	12.35	□□□□□ -0.43
KIFC3-222	ENST00000565481	TMEM8A	Q9HCN3	771 aa		12.35	□□□□□ -0.43
KIFC3-222	ENST00000565481	KRT82	Q9NSB4	513 aa		12.35	□□□□□ -0.43
KIFC3-222	ENST00000565481	CPQ	Q9Y646	472 aa		12.35	□□□□□ -0.43
KIFC3-222	ENST00000565481	ABCA7	Q8IZY2	2146 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	COCH	O43405	550 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	RNF40	O75150	1001 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	AP1G2	O75843	785 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	BEST1	O76090	585 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	CYP17A1	P05093	508 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	KRT13	P13646	458 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	CCDC130	P13994	396 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	OPRD1	P41143	372 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	ORC1	Q13415	861 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	PNOC	Q13519	176 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	BECN1	Q14457	450 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	FILIP1	Q7Z7B0	1213 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	DDX42	Q86XP3	938 aa	Known RBP eCLIP	12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	ZC3H3	Q8IXZ2	948 aa	Known RBP	12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	SMYD4	Q8IYR2	804 aa	Predicted RBP	12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	ADGRG2	Q8IZP9	1017 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	C12orf29	Q8N999	325 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	SLC2A14	Q8TDB8	520 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	WHAMM	Q8TF30	809 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	SECISBP2L	Q93073	1101 aa	Known RBP	12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	FAXDC2	Q96IV6	333 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	GSDMA	Q96QA5	445 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	HNRNPAB	Q99729	332 aa	Known RBP	12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	MED10	Q9BTT4	135 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	NIF3L1	Q9GZT8	377 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	DLL3	Q9NYJ7	618 aa		12.34	□□□□□ -0.43
KIFC3-222	ENST00000565481	HHLA1	C9JL84	531 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	SLC9A3R1	O14745	358 aa	Predicted RBP	12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	LRP3	O75074	770 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	CILP	O75339	1184 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	CLSTN1	O94985	981 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	ABL1	P00519	1130 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	RET	P07949	1114 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	CHRM1	P11229	460 aa	Predicted RBP	12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	NUCB2	P80303	420 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	IFRD2	Q12894	506 aa	Predicted RBP	12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	SRSF5	Q13243	272 aa	Known RBP	12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	SIM2	Q14190	667 aa	Predicted RBP	12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	HECTD3	Q5T447	861 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	KRT39	Q6A163	491 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	HEATR6	Q6AI08	1181 aa	Known RBP	12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	CLEC20A	Q6ZU45	233 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	SYT13	Q7L8C5	426 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	CAMKK1	Q8N5S9	505 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	TTC16	Q8NEE8	873 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	NT5C1A	Q9BXI3	368 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	IMPG2	Q9BZV3	1241 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	PNPLA8	Q9NP80	782 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	PARD6A	Q9NPB6	346 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	FAM49B	Q9NUQ9	324 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	RMND1	Q9NWS8	449 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	SMPD4	Q9NXE4	827 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	CFAP97	Q9P2B7	532 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	GMEB2	Q9UKD1	530 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	RAB23	Q9ULC3	237 aa		12.33	□□□□□ -0.44
KIFC3-222	ENST00000565481	THADA	Q6YHU6	1953 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	E2F8	A0AVK6	867 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	MBL2	P11226	248 aa	Predicted RBP	12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	EIF2D	P41214	584 aa	Known RBP	12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	PRCP	P42785	496 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	PGF	P49763	221 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	PUM1	Q14671	1186 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	DHCR24	Q15392	516 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	ZNF658	Q5TYW1	1059 aa	Predicted RBP	12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	RHBDF2	Q6PJF5	856 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	RPLP0P6	Q8NHW5	317 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	CCDC26	Q8TAB7	109 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	GAB3	Q8WWW8	586 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	SEMA4D	Q92854	862 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	ACD	Q96AP0	544 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	OTUB2	Q96DC9	234 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	TIGD1	Q96MW7	591 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	FBXO44	Q9H4M3	255 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	FAM124B	Q9H5Z6	455 aa	Predicted RBP	12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	CCSER2	Q9H7U1	834 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	GMIP	Q9P107	970 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	TBC1D14	Q9P2M4	693 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	CHORDC1	Q9UHD1	332 aa	Predicted RBP	12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	SLC8A2	Q9UPR5	921 aa		12.32	□□□□□ -0.44
KIFC3-222	ENST00000565481	CEP192	Q8TEP8	1941 aa		12.31	□□□□□ -0.44
KIFC3-222	ENST00000565481		A0A0A0MRY4	1105 aa		12.31	□□□□□ -0.44
KIFC3-222	ENST00000565481	PRR5-ARHGAP8	B1AHC4	643 aa		12.31	□□□□□ -0.44
KIFC3-222	ENST00000565481		K7EQS6	105 aa		12.31	□□□□□ -0.44
KIFC3-222	ENST00000565481	CETN3	O15182	167 aa		12.31	□□□□□ -0.44
KIFC3-222	ENST00000565481	SLC16A3	O15427	465 aa	Known RBP	12.31	□□□□□ -0.44
KIFC3-222	ENST00000565481	STX10	O60499	249 aa		12.31	□□□□□ -0.44
KIFC3-222	ENST00000565481	FAM200B	P0CF97	657 aa		12.31	□□□□□ -0.44
KIFC3-222	ENST00000565481	EPB41	P11171	864 aa	Known RBP	12.31	□□□□□ -0.44
KIFC3-222	ENST00000565481	TRIM21	P19474	475 aa	Known RBP	12.31	□□□□□ -0.44
KIFC3-222	ENST00000565481	ADORA2B	P29275	332 aa		12.31	□□□□□ -0.44
KIFC3-222	ENST00000565481	MXI1	P50539	228 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms