RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 DHX8Q14562 1220 aaKnown RBP5.3□□□□□ -1.56
CHD9-215ENST00000565442 ARMC6Q6NXE6 501 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 CRTC1Q6UUV9 634 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 TSHZ1Q6ZSZ6 1077 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 USP49Q70CQ1 688 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 GPR149Q86SP6 731 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 CERS3Q8IU89 383 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 SLC15A3Q8IY34 581 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 GLIS1Q8NBF1 620 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 DNAJB14Q8TBM8 379 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 TMEM171Q8WVE6 324 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 OSBPL9Q96SU4 736 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 KRTAP1-5Q9BYS1 174 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 STK33Q9BYT3 514 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 SLC29A3Q9BZD2 475 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 AMBRA1Q9C0C7 1298 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.3□□□□□ -1.565e-6■■□□□ 11.5
CHD9-215ENST00000565442 DHX36Q9H2U1 1008 aaKnown RBP5.3□□□□□ -1.56
CHD9-215ENST00000565442 DKK4Q9UBT3 224 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 SSX2IPQ9Y2D8 614 aa5.3□□□□□ -1.56
CHD9-215ENST00000565442 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.3□□□□□ -1.56
CHD9-215ENST00000565442 IKBKBO14920 756 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 PPM1DO15297 605 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 FFAR2O15552 330 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 CSF1RP07333 972 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 PDHA1P08559 390 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 EGR2P11161 476 aaPredicted RBP5.29□□□□□ -1.56
CHD9-215ENST00000565442 ITGAMP11215 1152 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 GABRB3P28472 473 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 ADORA2AP29274 412 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 PPIFP30405 207 aaKnown RBP5.29□□□□□ -1.56
CHD9-215ENST00000565442 ATICP31939 592 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 MPLP40238 635 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 ABCG1P45844 678 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 HNRNPMP52272 730 aaKnown RBP eCLIP5.29□□□□□ -1.56
CHD9-215ENST00000565442 COPAP53621 1224 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 KRT72Q14CN4 511 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 SF3B3Q15393 1217 aaKnown RBP5.29□□□□□ -1.56
CHD9-215ENST00000565442 PUM3Q15397 648 aaKnown RBP5.29□□□□□ -1.56
CHD9-215ENST00000565442 ZNF750Q32MQ0 723 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 ANO1Q5XXA6 986 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 ICE2Q659A1 982 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 SFRP4Q6FHJ7 346 aaPredicted RBP5.29□□□□□ -1.56
CHD9-215ENST00000565442 PGBD2Q6P3X8 592 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 KRT28Q7Z3Y7 464 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 SPARTQ8N0X7 666 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 FAM109AQ8N4B1 249 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 SSH3Q8TE77 659 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 FAM136AQ96C01 138 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 SNX27Q96L92 541 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 NELL2Q99435 816 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 GDF15Q99988 308 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 EIF2AQ9BY44 585 aaKnown RBP5.29□□□□□ -1.56
CHD9-215ENST00000565442 ACTRT3Q9BYD9 372 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 TBCCD1Q9NVR7 557 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 RGL1Q9NZL6 768 aa5.29□□□□□ -1.56
CHD9-215ENST00000565442 RGS17Q9UGC6 210 aaPredicted RBP5.29□□□□□ -1.56
CHD9-215ENST00000565442 AQP7P3A6NL99 342 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 HNRNPDLO14979 420 aaKnown RBP5.28□□□□□ -1.56
CHD9-215ENST00000565442 CHKAP35790 457 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 ICA1Q05084 483 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 SCAPQ12770 1279 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 EIF2B5Q13144 721 aaKnown RBP5.28□□□□□ -1.56
CHD9-215ENST00000565442 DEPDC1Q5TB30 811 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 RAP1GAP2Q684P5 730 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 KIAA0408Q6ZU52 694 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 C1QL2Q7Z5L3 287 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 SLC44A3Q8N4M1 653 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 ZNF366Q8N895 744 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 B3GALNT2Q8NCR0 500 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 IPO4Q8TEX9 1081 aaKnown RBP5.28□□□□□ -1.56
CHD9-215ENST00000565442 ZNF384Q8TF68 577 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 LPIN2Q92539 896 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 OBP2BQ9NPH6 170 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 CAPN11Q9UMQ6 739 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 HPSEQ9Y251 543 aa5.28□□□□□ -1.56
CHD9-215ENST00000565442 HGFP14210 728 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 IDEP14735 1019 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 PDIA3P30101 505 aaKnown RBP5.27□□□□□ -1.57
CHD9-215ENST00000565442 HALP42357 657 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 RAB30Q15771 203 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 CCDC38Q502W7 563 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 ARHGAP15Q53QZ3 475 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 CCDC28AQ8IWP9 274 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 Q8N9P0 234 aaPredicted RBP5.27□□□□□ -1.57
CHD9-215ENST00000565442 ATG16L2Q8NAA4 619 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 TOR1AIP2Q8NFQ8 470 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 CYP2W1Q8TAV3 490 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 ATG4AQ8WYN0 398 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 FUBP1Q96AE4 644 aaKnown RBP5.27□□□□□ -1.57
CHD9-215ENST00000565442 ZBTB45Q96K62 511 aaPredicted RBP5.27□□□□□ -1.57
CHD9-215ENST00000565442 C1QTNF7Q9BXJ2 289 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 TRIM5Q9C035 493 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 PCDHAC1Q9H158 963 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 FAM83DQ9H4H8 585 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 CASS4Q9NQ75 786 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 TM7SF3Q9NS93 570 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 IGSF9Q9P2J2 1179 aa5.27□□□□□ -1.57
CHD9-215ENST00000565442 ZMYND8Q9ULU4 1186 aaPredicted RBP5.27□□□□□ -1.57
CHD9-215ENST00000565442 SNX14Q9Y5W7 946 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms