RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 MCCD1P59942 119 aaPredicted RBP10.63□□□□□ -0.71
CMTM3-209ENST00000565003 ENPEPQ07075 957 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 SIM2Q14190 667 aaPredicted RBP10.63□□□□□ -0.71
CMTM3-209ENST00000565003 PRR23BQ6ZRT6 265 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 GPRIN1Q7Z2K8 1008 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 FILIP1Q7Z7B0 1213 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 LONP2Q86WA8 852 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 PDZD8Q8NEN9 1154 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 WHAMMQ8TF30 809 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 OVCA2Q8WZ82 227 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 SEMA4DQ92854 862 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 CCDC34Q96HJ3 373 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 IMPG2Q9BZV3 1241 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 CCSER2Q9H7U1 834 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 TMEM8AQ9HCN3 771 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 CSNK1G1Q9HCP0 422 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 CFAP97Q9P2B7 532 aa10.63□□□□□ -0.71
CMTM3-209ENST00000565003 CHORDC1Q9UHD1 332 aaPredicted RBP10.63□□□□□ -0.71
CMTM3-209ENST00000565003 MYO16Q9Y6X6 1858 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 GOLGA6L4A6NEF3 574 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 ANTXRLA6NF34 631 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 HHLA1C9JL84 531 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 CILPO75339 1184 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 ZDHHC11BP0C7U3 371 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 CD58P19256 250 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 GTF2H1P32780 548 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 PXNP49023 591 aaPredicted RBP10.62□□□□□ -0.71
CMTM3-209ENST00000565003 PMS1P54277 932 aaKnown RBP10.62□□□□□ -0.71
CMTM3-209ENST00000565003 NUCB2P80303 420 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 NR1H3Q13133 447 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 FBXO43Q4G163 708 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 ZNF658Q5TYW1 1059 aaPredicted RBP10.62□□□□□ -0.71
CMTM3-209ENST00000565003 SNX30Q5VWJ9 437 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 KRT39Q6A163 491 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 CLEC20AQ6ZU45 233 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 WDR5BQ86VZ2 330 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 ADGRG2Q8IZP9 1017 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 RPLP0P6Q8NHW5 317 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 SPATA20Q8TB22 786 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 SECISBP2LQ93073 1101 aaKnown RBP10.62□□□□□ -0.71
CMTM3-209ENST00000565003 JAKMIP2Q96AA8 810 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 GSDMAQ96QA5 445 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 NT5C1AQ9BXI3 368 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 CYP3A43Q9HB55 503 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 PARD6AQ9NPB6 346 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 RMND1Q9NWS8 449 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 GMEB2Q9UKD1 530 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 RAB23Q9ULC3 237 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 PCDHA5Q9Y5H7 936 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 KIAA1549LQ6ZVL6 1849 aa10.62□□□□□ -0.71
CMTM3-209ENST00000565003 DNAH14Q0VDD8 3507 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 TRIM49BA6NDI0 452 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 CETN3O15182 167 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 ATG13O75143 517 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 FAM200BP0CF97 657 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 EPB41P11171 864 aaKnown RBP10.61□□□□□ -0.71
CMTM3-209ENST00000565003 CNR2P34972 360 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 MXI1P50539 228 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 TUBP50607 506 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 MESP2Q0VG99 397 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 DHCR24Q15392 516 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 CBWD6Q4V339 395 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 COBLL1Q53SF7 1204 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 CBWD3Q5JTY5 395 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 CBWD5Q5RIA9 395 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 HECTD3Q5T447 861 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 ANKRD40Q6AI12 368 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 LAIR1Q6GTX8 287 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 RHBDF2Q6PJF5 856 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 C12orf40Q86WS4 652 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 DDX42Q86XP3 938 aaKnown RBP eCLIP10.61□□□□□ -0.71
CMTM3-209ENST00000565003 ZC3H3Q8IXZ2 948 aaKnown RBP10.61□□□□□ -0.71
CMTM3-209ENST00000565003 KIAA1958Q8N8K9 716 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 FBXL13Q8NEE6 735 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 WBP2Q969T9 261 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 EXOC4Q96A65 974 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 CYFIP2Q96F07 1278 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 HHIPQ96QV1 700 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 HNRNPABQ99729 332 aaKnown RBP10.61□□□□□ -0.71
CMTM3-209ENST00000565003 ARID3AQ99856 593 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 COMMD8Q9NX08 183 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 OSER1Q9NX31 292 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 SLC8A2Q9UPR5 921 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 MYH10P35580 1976 aa10.61□□□□□ -0.71
CMTM3-209ENST00000565003 WDR87Q6ZQQ6 2873 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 E2F8A0AVK6 867 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 K7EQS6 105 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 SLC9A3R1O14745 358 aaPredicted RBP10.6□□□□□ -0.71
CMTM3-209ENST00000565003 SLC16A3O15427 465 aaKnown RBP10.6□□□□□ -0.71
CMTM3-209ENST00000565003 CYP26A1O43174 497 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 TLR5O60602 858 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 SEC13P55735 322 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 SPEM2Q0P670 501 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 ZNF394Q53GI3 561 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 DCAF17Q5H9S7 520 aaPredicted RBP10.6□□□□□ -0.71
CMTM3-209ENST00000565003 PPP1R26Q5T8A7 1209 aaPredicted RBP10.6□□□□□ -0.71
CMTM3-209ENST00000565003 CEP68Q76N32 757 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 SYT13Q7L8C5 426 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.6□□□□□ -0.71
CMTM3-209ENST00000565003 SFTPA1Q8IWL2 248 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms