RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 PM20D1Q6GTS8 502 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 PDZD4Q76G19 769 aaPredicted RBP13.13□□□□□ -0.31
KARS-204ENST00000564578 TMEM35BQ8NCS4 154 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 SLC30A5Q8TAD4 765 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 CPA5Q8WXQ8 436 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 NDRG1Q92597 394 aaKnown RBP13.13□□□□□ -0.31
KARS-204ENST00000564578 FBXO44Q9H4M3 255 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 SCML2Q9UQR0 700 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 TRIOO75962 3097 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 E5RJQ4 531 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 DDX3XO00571 662 aaKnown RBP eCLIP13.13□□□□□ -0.311e-29■■■□□ 18.6
KARS-204ENST00000564578 LSM8O95777 96 aaKnown RBP13.13□□□□□ -0.31
KARS-204ENST00000564578 SERPING1P05155 500 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 USP17L7P0C7H9 530 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 ZDHHC11BP0C7U3 371 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 IL9P15248 144 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 STXBP5Q5T5C0 1151 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 NAA35Q5VZE5 725 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.13□□□□□ -0.31
KARS-204ENST00000564578 CNGA4Q8IV77 575 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 SCUBE3Q8IX30 993 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 DRC7Q8IY82 874 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 LEMD2Q8NC56 503 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 NECTIN4Q96NY8 510 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 CHP1Q99653 195 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 ULBP1Q9BZM6 244 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 PDCL3Q9H2J4 239 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 LRRC4Q9HBW1 653 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 ST7Q9NRC1 585 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 COMMD8Q9NX08 183 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 OSER1Q9NX31 292 aa13.13□□□□□ -0.31
KARS-204ENST00000564578 DOCK8Q8NF50 2099 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 ZNF840PA6NDX5 716 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 PAPSS1O43252 624 aaPredicted RBP13.12□□□□□ -0.31
KARS-204ENST00000564578 ZBED1O96006 694 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 TPM1P09493 284 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 LCP1P13796 627 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 CEBPBP17676 345 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 FSHRP23945 695 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 MRE11P49959 708 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 C2CD6Q53TS8 623 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 SPC24Q8NBT2 197 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 CLEC4CQ8WTT0 213 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 ING5Q8WYH8 240 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 FGF13Q92913 245 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 FBXO32Q969P5 355 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 PIWIL1Q96J94 861 aaKnown RBP13.12□□□□□ -0.31
KARS-204ENST00000564578 PPP1R13BQ96KQ4 1090 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 ZSWIM3Q96MP5 696 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 NMUR1Q9HB89 426 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 TAS2R14Q9NYV8 317 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 EHD2Q9NZN4 543 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 GMIPQ9P107 970 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 UXTQ9UBK9 157 aaPredicted RBP13.12□□□□□ -0.31
KARS-204ENST00000564578 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
KARS-204ENST00000564578 BZW2Q9Y6E2 419 aaKnown RBP13.12□□□□□ -0.31
KARS-204ENST00000564578 NCANO14594 1321 aa13.12□□□□□ -0.31
KARS-204ENST00000564578 ZNF197O14709 1029 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 ERBB2P04626 1255 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 MMP8P22894 467 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 CDC25CP30307 473 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 CYP4F8P98187 520 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 TEAD2Q15562 447 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 CLEC16AQ2KHT3 1053 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 ASTE1Q2TB18 679 aaPredicted RBP13.11□□□□□ -0.31
KARS-204ENST00000564578 SNX30Q5VWJ9 437 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 TRIM72Q6ZMU5 477 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 NPAS3Q8IXF0 933 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 SCML4Q8N228 414 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 ATXN2LQ8WWM7 1075 aaKnown RBP13.11□□□□□ -0.31
KARS-204ENST00000564578 SLITRK1Q96PX8 696 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 MYADMQ96S97 322 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 MIS12Q9H081 205 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 ATXN3LQ9H3M9 355 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 CYLDQ9NQC7 956 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 CNGB3Q9NQW8 809 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 ADAMTS1Q9UHI8 967 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 CEP83Q9Y592 693 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 DENND4AQ7Z401 1863 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 C2orf78A6NCI8 922 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 YJEFN3A6XGL0 299 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 E7ENQ6 273 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 BMP1P13497 986 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 TNFAIP3P21580 790 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 ACADSBP45954 432 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 GABRB2P47870 512 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 DAOAP59103 153 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 CENPCQ03188 943 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 PTP4A2Q12974 167 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 PUS10Q3MIT2 529 aaKnown RBP13.11□□□□□ -0.31
KARS-204ENST00000564578 TDRD12Q587J7 1177 aaKnown RBP13.11□□□□□ -0.31
KARS-204ENST00000564578 TXNDC8Q6A555 127 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 GET4Q7L5D6 327 aaPredicted RBP13.11□□□□□ -0.31
KARS-204ENST00000564578 MON1AQ86VX9 555 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 DNAAF5Q86Y56 855 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 SIX6OS1Q8N1H7 587 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 OVCA2Q8WZ82 227 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 SLC22A12Q96S37 553 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms