RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TFR2Q9UP52 801 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 SLC27A5Q9Y2P5 690 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 NLRC5Q86WI3 1866 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 PLXNA4Q9HCM2 1894 aa13.59□□□□□ -0.23
SPG7-209ENST00000564047 USP34Q70CQ2 3546 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 A0A0U1RQJ8 604 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 PRR33A8MZF0 331 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 TGM5O43548 720 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 GABBR2O75899 941 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 SEC24AO95486 1093 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 ELF1P32519 619 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 ARHGAP25P42331 645 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 ARHGAP29Q52LW3 1261 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 C2CD6Q53TS8 623 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 CYP4A22Q5TCH4 519 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 PLEKHA7Q6IQ23 1121 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 XYLT1Q86Y38 959 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 RHOT2Q8IXI1 618 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 TCEAL8Q8IYN2 117 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 TTC9BQ8N6N2 239 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 C3orf20Q8ND61 904 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 ATRIPQ8WXE1 791 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 RFFLQ8WZ73 363 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 KHSRPQ92945 711 aaKnown RBP eCLIP13.58□□□□□ -0.241e-10■■■■□ 20.5
SPG7-209ENST00000564047 ARHGEF26Q96DR7 871 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 MCRS1Q96EZ8 462 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 SPATA17Q96L03 361 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 SEPT5Q99719 369 aaPredicted RBP13.58□□□□□ -0.24
SPG7-209ENST00000564047 CYP4F11Q9HBI6 524 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 MRPL47Q9HD33 250 aaKnown RBP13.58□□□□□ -0.24
SPG7-209ENST00000564047 PARVAQ9NVD7 372 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 TJP2Q9UDY2 1190 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 SCINQ9Y6U3 715 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 NCANO14594 1321 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 TRIOO75962 3097 aa13.58□□□□□ -0.24
SPG7-209ENST00000564047 TCRBV5S1A1TA0A578 114 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 EPOPA6NHQ4 379 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 USP27XA6NNY8 438 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 RFXAPO00287 272 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 RIOK3O14730 519 aaKnown RBP13.57□□□□□ -0.24
SPG7-209ENST00000564047 TNFRSF10BO14763 440 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 PAPSS1O43252 624 aaPredicted RBP13.57□□□□□ -0.24
SPG7-209ENST00000564047 CTIFO43310 598 aaKnown RBP13.57□□□□□ -0.24
SPG7-209ENST00000564047 RRP9O43818 475 aaKnown RBP13.57□□□□□ -0.24
SPG7-209ENST00000564047 FBXO21O94952 628 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 GLUD1P00367 558 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 LCP1P13796 627 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 SCNN1AP37088 669 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 TKTL1P51854 596 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 SLC5A3P53794 718 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 ADIGQ0VDE8 80 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 PTPROQ16827 1216 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 DDR2Q16832 855 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 RTL10Q7L3V2 364 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 GPRIN1Q7Z2K8 1008 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 SCUBE3Q8IX30 993 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 NUP93Q8N1F7 819 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 SIX6OS1Q8N1H7 587 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 SCML4Q8N228 414 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 GDPD5Q8WTR4 605 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 CALR3Q96L12 384 aaKnown RBP13.57□□□□□ -0.24
SPG7-209ENST00000564047 LZTFL1Q9NQ48 299 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 CNGB3Q9NQW8 809 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 COMMD8Q9NX08 183 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 UVRAGQ9P2Y5 699 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 MYO1AQ9UBC5 1043 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 FBXW11Q9UKB1 542 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 PCDHGC5Q9Y5F6 944 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 USP3Q9Y6I4 520 aa13.57□□□□□ -0.24
SPG7-209ENST00000564047 SIGLEC16A6NMB1 481 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 PIK3R2O00459 728 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 PRRG1O14668 218 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 SART1O43290 800 aaKnown RBP13.56□□□□□ -0.24
SPG7-209ENST00000564047 ATMINO43313 823 aaPredicted RBP13.56□□□□□ -0.24
SPG7-209ENST00000564047 CLASP2O75122 1294 aaKnown RBP13.56□□□□□ -0.24
SPG7-209ENST00000564047 MTA2O94776 668 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 CSPG5O95196 566 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 ATF6P18850 670 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 ALDH1A3P47895 512 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 GPR15P49685 360 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 CLCN4P51793 760 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 HADHBP55084 474 aaKnown RBP13.56□□□□□ -0.24
SPG7-209ENST00000564047 SLC6A3Q01959 620 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 PLD1Q13393 1074 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 MAMLD1Q13495 774 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 PPP1R15BQ5SWA1 713 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 PM20D1Q6GTS8 502 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 OR6B2Q6IFH4 312 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 DNAJC24Q6P3W2 148 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 OLFML1Q6UWY5 402 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 CCDC149Q6ZUS6 474 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 DENND5BQ6ZUT9 1274 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 FAM183BPQ6ZVS7 135 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 PHLDB2Q86SQ0 1253 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 RNF10Q8N5U6 811 aaKnown RBP13.56□□□□□ -0.24
SPG7-209ENST00000564047 KREMEN2Q8NCW0 462 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 SLC35G2Q8TBE7 412 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 IRGQQ8WZA9 623 aa13.56□□□□□ -0.24
SPG7-209ENST00000564047 MRPL38Q96DV4 380 aaKnown RBP13.56□□□□□ -0.24
SPG7-209ENST00000564047 NUP85Q9BW27 656 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms