RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 SFNP31947 248 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 SETQ01105 290 aaPredicted RBP11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 POU5F1BQ06416 359 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 BNIP3Q12983 259 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 TAF12Q16514 161 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 FOXR1Q6PIV2 292 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 ANO5Q75V66 913 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 TEX2Q8IWB9 1127 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 EXOC8Q8IYI6 725 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 CCDC82Q8N4S0 544 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 C6orf106Q9H6K1 298 aaPredicted RBP11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 DHX33Q9H6R0 707 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 PRDM8Q9NQV8 689 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 SEPT10Q9P0V9 454 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 NUB1Q9Y5A7 615 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 ANK2Q01484 3957 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 ZGRF1Q86YA3 2104 aa11.57□□□□□ -0.56
HDGFL3-204ENST00000563790 SIGLEC6O43699 453 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 CKMP06732 381 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 RARGP13631 454 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 HMGA1P17096 107 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 RXRGP48443 463 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 JAK3P52333 1124 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 HDAC4P56524 1084 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 DAB2P98082 770 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 ZNF211Q13398 564 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 C10orf76Q5T2E6 689 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 JAKMIP3Q5VZ66 844 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 SP5Q6BEB4 398 aaPredicted RBP11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 NUDT18Q6ZVK8 323 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 SIRT2Q8IXJ6 389 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 KIAA1958Q8N8K9 716 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 TERB1Q8NA31 727 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 CPT1CQ8TCG5 803 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 BIRC7Q96CA5 298 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 CYP2S1Q96SQ9 504 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 ORAI3Q9BRQ5 295 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 MKRN2Q9H000 416 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 PPM1HQ9ULR3 514 aa11.56□□□□□ -0.56
HDGFL3-204ENST00000563790 TRAV19A0A0A6YYK7 116 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 A0A1B0GVM2 712 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 OR6C75A6NL08 312 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 LARGE1O95461 756 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 QARSP47897 775 aaKnown RBP11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 TUFMP49411 452 aaKnown RBP11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 RACK1P63244 317 aaKnown RBP11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 YWHAHQ04917 246 aaPredicted RBP11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 ZC2HC1CQ53FD0 456 aaPredicted RBP11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 RHBDF2Q6PJF5 856 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 TEX19Q8NA77 164 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 TCP11Q8WWU5 503 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 CRYGNQ8WXF5 182 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 ABHD17AQ96GS6 310 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 C5orf34Q96MH7 638 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 PCDHB8Q9UN66 801 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 STK36Q9NRP7 1315 aa11.55□□□□□ -0.56
HDGFL3-204ENST00000563790 CCER2I3L3R5 266 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 GFRA2O00451 464 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 TRIM38O00635 465 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 TADA3O75528 432 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 ADH1CP00326 375 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 NFICP08651 508 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 CYP3A4P08684 503 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 ADH5P11766 374 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 MYBPC2Q14324 1141 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 FUT11Q495W5 492 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 PLA2G4FQ68DD2 849 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 FILIP1Q7Z7B0 1213 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 PRIMA1Q86XR5 153 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 ITPRIPQ8IWB1 547 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 ETFBKMTQ8IXQ9 262 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 GIPC2Q8TF65 315 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 SKA1Q96BD8 255 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 FAM212AQ96EL1 285 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 SEPT5Q99719 369 aaPredicted RBP11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 NFKBIZQ9BYH8 718 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 ABCG4Q9H172 646 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 GDF3Q9NR23 364 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 ARHGAP26Q9UNA1 814 aa11.54□□□□□ -0.56
HDGFL3-204ENST00000563790 MYO7BQ6PIF6 2116 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 HMMRO75330 724 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 WNT1P04628 370 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 CKMT1AP12532 417 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 FUT2Q10981 343 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 MXD4Q14582 209 aaPredicted RBP11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 RDH13Q8NBN7 331 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 RDM1Q8NG50 284 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 LRRC15Q8TF66 581 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 HELLSQ9NRZ9 838 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 GCNT4Q9P109 453 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 SLC5A6Q9Y289 635 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 PPME1Q9Y570 386 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 PCDHB6Q9Y5E3 794 aa11.53□□□□□ -0.56
HDGFL3-204ENST00000563790 CCDC187A0A096LP49 1063 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 FAM221AA4D161 298 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 TULP3O75386 442 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 MARCKSP29966 332 aaPredicted RBP11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 MCM4P33991 863 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 PTGER4P35408 488 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms