RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 CBX6O95503 412 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 ASMTLO95671 621 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 CST3P01034 146 aaPredicted RBP10.88□□□□□ -0.67
RNF40-204ENST00000563683 RANBP1P43487 201 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 GEMIN4P57678 1058 aaKnown RBP10.88□□□□□ -0.67
RNF40-204ENST00000563683 PTPN11Q06124 597 aaPredicted RBP10.88□□□□□ -0.67
RNF40-204ENST00000563683 CAPSQ13938 189 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 PDK4Q16654 411 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 CATSPERGQ6ZRH7 1159 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 BRSK2Q8IWQ3 736 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 AGR3Q8TD06 166 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 TSSK1BQ9BXA7 367 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 FHDC1Q9C0D6 1143 aaPredicted RBP10.88□□□□□ -0.67
RNF40-204ENST00000563683 SPC25Q9HBM1 224 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 USP18Q9UMW8 372 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 PDLIM1O00151 329 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 FSCN2O14926 492 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 PRPF4O43172 522 aaKnown RBP eCLIP10.88□□□□□ -0.67
RNF40-204ENST00000563683 IL18RAPO95256 599 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 SLC25A27O95847 323 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 INSRRP14616 1297 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 SERPINB6P35237 376 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 TGFB2P61812 414 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 GOLGA7BQ2TAP0 167 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 LRRC74BQ6ZQY2 392 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 ZDHHC14Q8IZN3 488 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 CYP4X1Q8N118 509 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 RXFP2Q8WXD0 754 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 FAM111AQ96PZ2 611 aa10.88□□□□□ -0.67
RNF40-204ENST00000563683 NR1H4Q96RI1 486 aaPredicted RBP10.88□□□□□ -0.67
RNF40-204ENST00000563683 CHCHD3Q9NX63 227 aaKnown RBP10.88□□□□□ -0.67
RNF40-204ENST00000563683 UMODL1Q5DID0 1318 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 C2CD2LO14523 706 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 DHX15O43143 795 aaKnown RBP10.87□□□□□ -0.67
RNF40-204ENST00000563683 VCPP55072 806 aaKnown RBP10.87□□□□□ -0.67
RNF40-204ENST00000563683 WDR4P57081 412 aaKnown RBP10.87□□□□□ -0.67
RNF40-204ENST00000563683 NOMO3P69849 1222 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 PKN2Q16513 984 aaKnown RBP10.87□□□□□ -0.67
RNF40-204ENST00000563683 MROH9Q5TGP6 573 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 NLRP9Q7RTR0 991 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 WDR75Q8IWA0 830 aaKnown RBP10.87□□□□□ -0.67
RNF40-204ENST00000563683 ANKRD13AQ8IZ07 590 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 DCLK2Q8N568 766 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 OLIG1Q8TAK6 271 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 PLEKHO2Q8TD55 490 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 VCPIP1Q96JH7 1222 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 SIK2Q9H0K1 926 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 ZNF212Q9UDV6 495 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 DNALI1O14645 258 aaPredicted RBP10.87□□□□□ -0.67
RNF40-204ENST00000563683 ABHD2P08910 425 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 T-ENOLP0DO92 83 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 MCL1Q07820 350 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 KHDC1Q4VXA5 237 aaKnown RBP10.87□□□□□ -0.67
RNF40-204ENST00000563683 GJC2Q5T442 439 aaPredicted RBP10.87□□□□□ -0.67
RNF40-204ENST00000563683 OR6J1Q8NGC5 347 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 UCMAQ8WVF2 138 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 BTBD10Q9BSF8 475 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 NACA2Q9H009 215 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 DPP3Q9NY33 737 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 NOCTQ9UK39 431 aaKnown RBP10.87□□□□□ -0.67
RNF40-204ENST00000563683 TLK1Q9UKI8 766 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 ANGPTL2Q9UKU9 493 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 INPP5FQ9Y2H2 1132 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 SPDYE16A6NNV3 312 aaPredicted RBP10.87□□□□□ -0.67
RNF40-204ENST00000563683 ADM5C9JUS6 153 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 SERPINB4P48594 390 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 KDSRQ06136 332 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 TAF12Q16514 161 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 AFG1LQ8WV93 481 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 C10orf82Q8WW14 230 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 PTPRN2Q92932 1015 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 BORCS6Q96GS4 357 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 TMEM176AQ96HP8 235 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 CENPKQ9BS16 269 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 PCMTD2Q9NV79 361 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 SLC4A7Q9Y6M7 1214 aa10.87□□□□□ -0.67
RNF40-204ENST00000563683 TRIM49D1C9J1S8 452 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 ATP9BO43861 1147 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 BANF1O75531 89 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 TYK2P29597 1187 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 OAZ1P54368 228 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 MORF4L2Q15014 288 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 SIX1Q15475 284 aaPredicted RBP10.86□□□□□ -0.67
RNF40-204ENST00000563683 DCAF6Q58WW2 860 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 DENND1BQ6P3S1 775 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 ABHD15Q6UXT9 468 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 ZPBP2Q6X784 338 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 CD101Q93033 1021 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 IFT43Q96FT9 208 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 PAFAH2Q99487 392 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 ZNF518BQ9C0D4 1074 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 SMYD3Q9H7B4 428 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 PPCSQ9HAB8 311 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 XPNPEP1Q9NQW7 623 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 ATRNL1Q5VV63 1379 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 TOGARAM1Q9Y4F4 1720 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 SPATA31C2B4DYI2 1134 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 ZNF286BP0CG31 522 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 TGFB3P10600 412 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 GSTT1P30711 240 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms