RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 MFAP3P55082 362 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 APBA1Q02410 837 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 USP4Q13107 963 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 CNGA2Q16280 664 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 PKDCCQ504Y2 493 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 DPY19L2P1Q6NXN4 242 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 GJB7Q6PEY0 223 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 LCLAT1Q6UWP7 414 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 TPRG1Q6ZUI0 275 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 PIGZQ86VD9 579 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 SH3RF2Q8TEC5 729 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 SIX2Q9NPC8 291 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 FANCLQ9NW38 375 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 APEX2Q9UBZ4 518 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 HCN4Q9Y3Q4 1203 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 F5P12259 2224 aa21.4■■□□□ 1.02
CMTM3-206ENST00000563672 ZNF638Q14966 1978 aaKnown RBP21.39■■□□□ 1.02
CMTM3-206ENST00000563672 COCHO43405 550 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 NUBP1P53384 320 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 BCAT1P54687 386 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 SLC8A3P57103 927 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 MYL5Q02045 173 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 PDE4CQ08493 712 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 BST2Q10589 180 aaKnown RBP21.39■■□□□ 1.01
CMTM3-206ENST00000563672 KLHL40Q2TBA0 621 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 RAB41Q5JT25 222 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 HECTD3Q5T447 861 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 SMYD5Q6GMV2 418 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 CSGALNACT1Q8TDX6 532 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 FOXQ1Q9C009 403 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 KCNH6Q9H252 994 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 TLR8Q9NR97 1041 aaKnown RBP21.39■■□□□ 1.01
CMTM3-206ENST00000563672 HESX1Q9UBX0 185 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 ARIH1Q9Y4X5 557 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-206ENST00000563672 PIAS3Q9Y6X2 628 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 MUC6Q6W4X9 2439 aa21.39■■□□□ 1.01
CMTM3-206ENST00000563672 TULP2O00295 520 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 MAN2B1O00754 1011 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 XPO1O14980 1071 aaKnown RBP21.38■■□□□ 1.01
CMTM3-206ENST00000563672 CYP26A1O43174 497 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 CD72P21854 359 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 RFX1P22670 979 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 TNK2Q07912 1038 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 MTF1Q14872 753 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 STILQ15468 1287 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 ZNF852Q6ZMS4 543 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 CCDC186Q7Z3E2 898 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 PJA1Q8NG27 643 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 UBA3Q8TBC4 463 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 OSBPL6Q9BZF3 934 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 CCSER2Q9H7U1 834 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 NMUR1Q9HB89 426 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 LTB4R2Q9NPC1 389 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 HPS4Q9NQG7 708 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 OSER1Q9NX31 292 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 GTSE1Q9NYZ3 720 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.38■■□□□ 1.01
CMTM3-206ENST00000563672 SIT1Q9Y3P8 196 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 MTF2Q9Y483 593 aaPredicted RBP21.38■■□□□ 1.01
CMTM3-206ENST00000563672 CPQQ9Y646 472 aa21.38■■□□□ 1.01
CMTM3-206ENST00000563672 COL4A3Q01955 1670 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 LEFTY2O00292 366 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 CALCAP01258 141 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 SETSIPP0DME0 302 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 KRT5P13647 590 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 BRD2P25440 801 aaKnown RBP21.37■■□□□ 1.01
CMTM3-206ENST00000563672 KCNMA1Q12791 1236 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 NCAPHQ15003 741 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 PDGFRLQ15198 375 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 KRT31Q15323 416 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 CC2D1AQ6P1N0 951 aaPredicted RBP21.37■■□□□ 1.01
CMTM3-206ENST00000563672 SCD5Q86SK9 330 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 KIAA1958Q8N8K9 716 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 OSCP1Q8WVF1 389 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 SHC3Q92529 594 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 NELL2Q99435 816 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 C8orf33Q9H7E9 229 aaPredicted RBP21.37■■□□□ 1.01
CMTM3-206ENST00000563672 CYLDQ9NQC7 956 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 TAB2Q9NYJ8 693 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 DLGAP2Q9P1A6 1054 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 COL4A2P08572 1712 aa21.37■■□□□ 1.01
CMTM3-206ENST00000563672 PATJQ8NI35 1801 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 A0A1W2PQH9 124 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 FAM170BA6NMN3 283 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 BECN2A8MW95 431 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 TLR5O60602 858 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 MBL2P11226 248 aaPredicted RBP21.36■■□□□ 1.01
CMTM3-206ENST00000563672 TARSP26639 723 aaKnown RBP21.36■■□□□ 1.01
CMTM3-206ENST00000563672 PLA2G4AP47712 749 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 ITPRIPL2Q3MIP1 535 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 TRIM68Q6AZZ1 485 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 PM20D1Q6GTS8 502 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 CCDC105Q8IYK2 499 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 ZNF687Q8N1G0 1237 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 SLC35F5Q8WV83 523 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 KCTD13Q8WZ19 329 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 MSANTD3Q96H12 275 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 ZFRQ96KR1 1074 aaKnown RBP21.36■■□□□ 1.01
CMTM3-206ENST00000563672 SMPD4Q9NXE4 827 aa21.36■■□□□ 1.01
CMTM3-206ENST00000563672 KMT2EQ8IZD2 1858 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms