RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 VNN1O95497 513 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 C4BPAP04003 597 aaKnown RBP17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 BCKDHBP21953 392 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 GBP1P32455 592 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 EIF2DP41214 584 aaKnown RBP17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 DLG4P78352 724 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 STK4Q13043 487 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 BIRC3Q13489 604 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 NCOA4Q13772 614 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 PKP1Q13835 747 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CRY1Q16526 586 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 N4BP2L1Q5TBK1 243 aaPredicted RBP17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 PMS2CLQ68D20 193 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 TMEM92Q6UXU6 159 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SCARA5Q6ZMJ2 495 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 DDX42Q86XP3 938 aaKnown RBP eCLIP17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ALLCQ8N6M5 410 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 PDZD8Q8NEN9 1154 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 OVCA2Q8WZ82 227 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 FBXO32Q969P5 355 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 PNKPQ96T60 521 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CFAP47Q6ZTR5 3102 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 WDFY3Q8IZQ1 3526 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ASPMQ8IZT6 3477 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ACACBO00763 2458 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 KAT7O95251 611 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CAVIN2O95810 425 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SLC5A3P53794 718 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 MRPS21P82921 87 aaKnown RBP17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 USP39Q53GS9 565 aaKnown RBP17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ZNF667Q5HYK9 610 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SNX30Q5VWJ9 437 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 RNF43Q68DV7 783 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 FUKQ8N0W3 1084 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 PHTF2Q8N3S3 785 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 IL17RCQ8NAC3 791 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 GOLGA5Q8TBA6 731 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 EDEM2Q9BV94 578 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 LSM14BQ9BX40 385 aaKnown RBP17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CCSER2Q9H7U1 834 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 DMAC2Q9NW81 257 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 IL37Q9NZH6 218 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CHORDC1Q9UHD1 332 aaPredicted RBP17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SERTAD1Q9UHV2 236 aa17.72■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 A0A0A0MRY4 1105 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 E2F8A0AVK6 867 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 LNP1A1A4G5 178 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 FAM92AA1XBS5 289 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SGK1O00141 431 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ACTN4O43707 911 aaKnown RBP17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CLSTN1O94985 981 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ADH1CP00326 375 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ADH5P11766 374 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 PMLP29590 882 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 TIE1P35590 1138 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 KIR2DL1P43626 348 aaPredicted RBP17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 PGFP49763 221 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 AP3M2P53677 418 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 KDSRQ06136 332 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ORC1Q13415 861 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 LY6G5CQ5SRR4 150 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 EMC10Q5UCC4 262 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ACOT1Q86TX2 421 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CEP57L1Q8IYX8 460 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 TXNDC5Q8NBS9 432 aaKnown RBP17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ZMIZ2Q8NF64 920 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 TMEM174Q8WUU8 243 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 WBP2Q969T9 261 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SMARCD1Q96GM5 515 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 TNIP3Q96KP6 325 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 MED10Q9BTT4 135 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 KCTD10Q9H3F6 313 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 DMAP1Q9NPF5 467 aaPredicted RBP17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ZDHHC4Q9NPG8 344 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ARHGEF4Q9NR80 690 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 KRT82Q9NSB4 513 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 GMIPQ9P107 970 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 TBC1D14Q9P2M4 693 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 HMGXB4Q9UGU5 601 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CHD8Q9HCK8 2581 aa17.71■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ATP8B3O60423 1300 aa17.71■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 AP1G2O75843 785 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 BEST1O76090 585 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 KLF8O95600 359 aaPredicted RBP17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 APODP05090 189 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SLFN14P0C7P3 912 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ZDHHC11BP0C7U3 371 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 CCDC130P13994 396 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 DNM1Q05193 864 aaKnown RBP17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 KMT5BQ4FZB7 885 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 HECTD3Q5T447 861 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 C11orf74Q86VG3 221 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SLC9A9Q8IVB4 645 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ETFBKMTQ8IXQ9 262 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 OLIG1Q8TAK6 271 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 PAGE5Q96GU1 130 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SMOQ99835 787 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 NUP205Q92621 2012 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 MYOFQ9NZM1 2061 aa17.7■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 PATE3B3GLJ2 98 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms