RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 MLH1P40692 756 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 LHX1P48742 406 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 CDH6P55285 790 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 PPP2R2AP63151 447 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 PLCB3Q01970 1234 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 SP3Q02447 781 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 GPS1Q13098 491 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 DPYSL3Q14195 570 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 DSC3Q14574 896 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 NOMO1Q15155 1222 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 KCNA10Q16322 511 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 PTGISQ16647 500 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 ZSCAN26Q16670 478 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 C15orf59Q2T9L4 293 aaPredicted RBP13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 DNAJC21Q5F1R6 531 aaKnown RBP13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 EFHC1Q5JVL4 640 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 FAM26DQ5JW98 314 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 KCTD13Q8WZ19 329 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 CENPIQ92674 756 aaPredicted RBP13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 HAUS1Q96CS2 278 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 TTC25Q96NG3 672 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 ZNF670Q9BS34 389 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 C11orf84Q9BUA3 381 aaPredicted RBP13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 CFHR5Q9BXR6 569 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 MAK16Q9BXY0 300 aaKnown RBP13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 NGRNQ9NPE2 291 aaKnown RBP13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 UBN1Q9NPG3 1134 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 RNF19AQ9NV58 838 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 NINJ2Q9NZG7 142 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 CWC15Q9P013 229 aaKnown RBP13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 NOVA2Q9UNW9 492 aaKnown RBP13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 SQORQ9Y6N5 450 aa13.22□□□□□ -0.29
AC055717.2-201ENST00000561864 CFAP69A5D8W1 941 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 ARL5CA6NH57 179 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 RGS16O15492 202 aaPredicted RBP13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 DAB1O75553 588 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 GRAP2O75791 330 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 CD48P09326 243 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 NPR3P17342 541 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 HOXD10P28358 340 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 TKTP29401 623 aaKnown RBP13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 MDH1P40925 334 aaKnown RBP13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 ATP1A2P50993 1020 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 EIF3EP60228 445 aaKnown RBP13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 DYNLT1P63172 113 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 CDO1Q16878 200 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 ZNF618Q5T7W0 954 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 MAP3K21Q5TCX8 1036 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 SH3PXD2AQ5TCZ1 1133 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 LRRC31Q6UY01 552 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 STRADAQ7RTN6 431 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 RNF180Q86T96 592 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 SCUBE3Q8IX30 993 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 FUKQ8N0W3 1084 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 GSTCDQ8NEC7 633 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 RSAD2Q8WXG1 361 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 FAF2Q96CS3 445 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 PGBD4Q96DM1 585 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 SENP8Q96LD8 212 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 CFAP57Q96MR6 1250 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 SERPINB12Q96P63 405 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 RNF157Q96PX1 679 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 GAD1Q99259 594 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 DDX23Q9BUQ8 820 aaKnown RBP13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 DUSP16Q9BY84 665 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 ADAM7Q9H2U9 754 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 SLC12A6Q9UHW9 1150 aa13.21□□□□□ -0.29
AC055717.2-201ENST00000561864 TSC2P49815 1807 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 APOL1O14791 398 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 RASGRF2O14827 1237 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 FAM200BP0CF97 657 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 LCP1P13796 627 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 ZFXP17010 805 aaPredicted RBP13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 ATP5DP30049 168 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 CD52P31358 61 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 HPDP32754 393 aaPredicted RBP13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 HDAC4P56524 1084 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 ATP11AP98196 1134 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 ROR1Q01973 937 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 TAF5Q15542 800 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 TRIM71Q2Q1W2 868 aaKnown RBP13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 TNFAIP8L3Q5GJ75 292 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 RNASEH2BQ5TBB1 312 aaKnown RBP13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 WSCD1Q658N2 575 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 DSTYKQ6XUX3 929 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 AGMOQ6ZNB7 445 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 PSTKQ8IV42 348 aaKnown RBP13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 PPIL6Q8IXY8 311 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 GLIS1Q8NBF1 620 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 UROC1Q96N76 676 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 LPIN3Q9BQK8 851 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 SYT15Q9BQS2 421 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 TMEM121Q9BTD3 319 aa13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 SNRNP25Q9BV90 132 aaKnown RBP13.2□□□□□ -0.3
AC055717.2-201ENST00000561864 AGO3Q9H9G7 860 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms