RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 IFNAR2P48551 515 aa25.19■■□□□ 1.62
CDR2-202ENST00000561630 TUBP50607 506 aa25.19■■□□□ 1.62
CDR2-202ENST00000561630 MARSP56192 900 aaKnown RBP25.19■■□□□ 1.62
CDR2-202ENST00000561630 PON2Q15165 354 aa25.19■■□□□ 1.62
CDR2-202ENST00000561630 ZNF528Q3MIS6 628 aa25.19■■□□□ 1.62
CDR2-202ENST00000561630 TRIM59Q8IWR1 403 aa25.19■■□□□ 1.62
CDR2-202ENST00000561630 ATP2A3Q93084 1043 aa25.19■■□□□ 1.62
CDR2-202ENST00000561630 CHFRQ96EP1 664 aa25.19■■□□□ 1.62
CDR2-202ENST00000561630 SRRTQ9BXP5 876 aaKnown RBP25.19■■□□□ 1.62
CDR2-202ENST00000561630 DUSP16Q9BY84 665 aa25.19■■□□□ 1.62
CDR2-202ENST00000561630 CLSTN2Q9H4D0 955 aa25.19■■□□□ 1.62
CDR2-202ENST00000561630 GMIPQ9P107 970 aa25.19■■□□□ 1.62
CDR2-202ENST00000561630 CPQQ9Y646 472 aa25.19■■□□□ 1.62
CDR2-202ENST00000561630 KIF26AQ9ULI4 1882 aaPredicted RBP25.19■■□□□ 1.62
CDR2-202ENST00000561630 MIA3Q5JRA6 1907 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 P4HA2O15460 535 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 AMPD2Q01433 879 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 EML3Q32P44 896 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 DGKKQ5KSL6 1271 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 HECTD3Q5T447 861 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 GPRIN1Q7Z2K8 1008 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 CPA6Q8N4T0 437 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 LINC00597Q9H2U6 94 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 ECT2Q9H8V3 914 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 PRMT8Q9NR22 394 aaPredicted RBP25.18■■□□□ 1.62
CDR2-202ENST00000561630 SMPD4Q9NXE4 827 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 RWDD2AQ9UIY3 292 aa25.18■■□□□ 1.62
CDR2-202ENST00000561630 CACNA1IQ9P0X4 2223 aa25.17■■□□□ 1.62
CDR2-202ENST00000561630 COCHO43405 550 aa25.17■■□□□ 1.62
CDR2-202ENST00000561630 TBXAS1P24557 533 aaPredicted RBP25.17■■□□□ 1.62
CDR2-202ENST00000561630 YWHAEP62258 255 aaKnown RBP25.17■■□□□ 1.62
CDR2-202ENST00000561630 CETN1Q12798 172 aa25.17■■□□□ 1.62
CDR2-202ENST00000561630 LRMPQ12912 555 aa25.17■■□□□ 1.62
CDR2-202ENST00000561630 CCINQ13939 588 aa25.17■■□□□ 1.62
CDR2-202ENST00000561630 ARHGAP17Q68EM7 881 aa25.17■■□□□ 1.62
CDR2-202ENST00000561630 RBM12Q9NTZ6 932 aaKnown RBP25.17■■□□□ 1.62
CDR2-202ENST00000561630 SCML2Q9UQR0 700 aa25.17■■□□□ 1.62
CDR2-202ENST00000561630 ANAPC1Q9H1A4 1944 aa25.16■■□□□ 1.62
CDR2-202ENST00000561630 TRDMT1O14717 391 aaKnown RBP25.16■■□□□ 1.62
CDR2-202ENST00000561630 FGFR1OPO95684 399 aaKnown RBP25.16■■□□□ 1.62
CDR2-202ENST00000561630 MBL2P11226 248 aaPredicted RBP25.16■■□□□ 1.62
CDR2-202ENST00000561630 ACO1P21399 889 aaKnown RBP25.16■■□□□ 1.62
CDR2-202ENST00000561630 GJA4P35212 333 aa25.16■■□□□ 1.62
CDR2-202ENST00000561630 PGFP49763 221 aa25.16■■□□□ 1.62
CDR2-202ENST00000561630 CSTF1Q05048 431 aaKnown RBP25.16■■□□□ 1.62
CDR2-202ENST00000561630 GAS6Q14393 721 aa25.16■■□□□ 1.62
CDR2-202ENST00000561630 DDX42Q86XP3 938 aaKnown RBP eCLIP25.16■■□□□ 1.62
CDR2-202ENST00000561630 SYNPOQ8N3V7 929 aa25.16■■□□□ 1.62
CDR2-202ENST00000561630 UBR7Q8N806 425 aa25.16■■□□□ 1.62
CDR2-202ENST00000561630 LMO3Q8TAP4 145 aa25.16■■□□□ 1.62
CDR2-202ENST00000561630 JAKMIP2Q96AA8 810 aa25.16■■□□□ 1.62
CDR2-202ENST00000561630 CCSER2Q9H7U1 834 aa25.16■■□□□ 1.62
CDR2-202ENST00000561630 TLR8Q9NR97 1041 aaKnown RBP25.16■■□□□ 1.62
CDR2-202ENST00000561630 KIF11P52732 1056 aa25.15■■□□□ 1.62
CDR2-202ENST00000561630 KCNH2Q12809 1159 aa25.15■■□□□ 1.62
CDR2-202ENST00000561630 TMEM196Q5HYL7 178 aa25.15■■□□□ 1.62
CDR2-202ENST00000561630 ZC3H14Q6PJT7 736 aaKnown RBP25.15■■□□□ 1.62
CDR2-202ENST00000561630 MLKLQ8NB16 471 aa25.15■■□□□ 1.62
CDR2-202ENST00000561630 NKD2Q969F2 451 aaPredicted RBP25.15■■□□□ 1.62
CDR2-202ENST00000561630 ZFRQ96KR1 1074 aaKnown RBP25.15■■□□□ 1.62
CDR2-202ENST00000561630 NT5C1BQ96P26 610 aa25.15■■□□□ 1.62
CDR2-202ENST00000561630 MED15Q96RN5 788 aa25.15■■□□□ 1.62
CDR2-202ENST00000561630 SEMA4AQ9H3S1 761 aa25.15■■□□□ 1.62
CDR2-202ENST00000561630 CFAP97Q9P2B7 532 aa25.15■■□□□ 1.62
CDR2-202ENST00000561630 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.15■■□□□ 1.62
CDR2-202ENST00000561630 R4GN57 208 aa25.15■■□□□ 1.62
CDR2-202ENST00000561630 CYP26A1O43174 497 aa25.14■■□□□ 1.62
CDR2-202ENST00000561630 GFRA3O60609 400 aa25.14■■□□□ 1.62
CDR2-202ENST00000561630 NFATC1O95644 943 aa25.14■■□□□ 1.62
CDR2-202ENST00000561630 CCDC192P0DO97 292 aa25.14■■□□□ 1.62
CDR2-202ENST00000561630 GRSF1Q12849 480 aaKnown RBP eCLIP25.14■■□□□ 1.62
CDR2-202ENST00000561630 NR1H3Q13133 447 aa25.14■■□□□ 1.62
CDR2-202ENST00000561630 SPEM1Q8N4L4 309 aa25.14■■□□□ 1.62
CDR2-202ENST00000561630 UBXN6Q9BZV1 441 aa25.14■■□□□ 1.62
CDR2-202ENST00000561630 PRR23AA6NEV1 266 aa25.13■■□□□ 1.61
CDR2-202ENST00000561630 SLC9A3R1O14745 358 aaPredicted RBP25.13■■□□□ 1.61
CDR2-202ENST00000561630 TLR5O60602 858 aa25.13■■□□□ 1.61
CDR2-202ENST00000561630 AFPP02771 609 aaKnown RBP25.13■■□□□ 1.61
CDR2-202ENST00000561630 CCR3P51677 355 aa25.13■■□□□ 1.61
CDR2-202ENST00000561630 FSTL4Q6MZW2 842 aa25.13■■□□□ 1.61
CDR2-202ENST00000561630 Q6ZS52 159 aa25.13■■□□□ 1.61
CDR2-202ENST00000561630 ASCL5Q7RTU5 278 aa25.13■■□□□ 1.61
CDR2-202ENST00000561630 ANKRD52Q8NB46 1076 aa25.13■■□□□ 1.61
CDR2-202ENST00000561630 NELL1Q92832 810 aa25.13■■□□□ 1.61
CDR2-202ENST00000561630 CYLDQ9NQC7 956 aa25.13■■□□□ 1.61
CDR2-202ENST00000561630 LMBRD1Q9NUN5 540 aa25.13■■□□□ 1.61
CDR2-202ENST00000561630 USP3Q9Y6I4 520 aa25.13■■□□□ 1.61
CDR2-202ENST00000561630 ZNF638Q14966 1978 aaKnown RBP25.13■■□□□ 1.61
CDR2-202ENST00000561630 GALK1P51570 392 aa25.12■■□□□ 1.61
CDR2-202ENST00000561630 PPP2R5DQ14738 602 aa25.12■■□□□ 1.61
CDR2-202ENST00000561630 TSSK4Q6SA08 328 aa25.12■■□□□ 1.61
CDR2-202ENST00000561630 ADGRG2Q8IZP9 1017 aa25.12■■□□□ 1.61
CDR2-202ENST00000561630 PPM1KQ8N3J5 372 aa25.12■■□□□ 1.61
CDR2-202ENST00000561630 EHBP1Q8NDI1 1231 aa25.12■■□□□ 1.61
CDR2-202ENST00000561630 EXOC4Q96A65 974 aa25.12■■□□□ 1.61
CDR2-202ENST00000561630 P2RY13Q9BPV8 354 aa25.12■■□□□ 1.61
CDR2-202ENST00000561630 FBRSL1Q9HCM7 1045 aaKnown RBP25.12■■□□□ 1.61
CDR2-202ENST00000561630 OSER1Q9NX31 292 aa25.12■■□□□ 1.61
CDR2-202ENST00000561630 KIAA1257Q9ULG3 409 aa25.12■■□□□ 1.61
CDR2-202ENST00000561630 RIF1Q5UIP0 2472 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms