RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 ALYREFQ86V81 257 aaKnown RBP16.37■□□□□ 0.21
CCDC113-203ENST00000561517 UBR7Q8N806 425 aa16.37■□□□□ 0.21
CCDC113-203ENST00000561517 LMO3Q8TAP4 145 aa16.37■□□□□ 0.21
CCDC113-203ENST00000561517 HEXIM2Q96MH2 286 aaKnown RBP16.37■□□□□ 0.21
CCDC113-203ENST00000561517 MED15Q96RN5 788 aa16.37■□□□□ 0.21
CCDC113-203ENST00000561517 IER2Q9BTL4 223 aa16.37■□□□□ 0.21
CCDC113-203ENST00000561517 DUSP16Q9BY84 665 aa16.37■□□□□ 0.21
CCDC113-203ENST00000561517 FBXO44Q9H4M3 255 aa16.37■□□□□ 0.21
CCDC113-203ENST00000561517 LMAN1LQ9HAT1 526 aa16.37■□□□□ 0.21
CCDC113-203ENST00000561517 LMBRD1Q9NUN5 540 aa16.37■□□□□ 0.21
CCDC113-203ENST00000561517 SPATA6Q9NWH7 488 aaPredicted RBP16.37■□□□□ 0.21
CCDC113-203ENST00000561517 CHORDC1Q9UHD1 332 aaPredicted RBP16.37■□□□□ 0.21
CCDC113-203ENST00000561517 MYO18AQ92614 2054 aaKnown RBP16.36■□□□□ 0.21
CCDC113-203ENST00000561517 LEFTY2O00292 366 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 FGFR1OPO95684 399 aaKnown RBP16.36■□□□□ 0.21
CCDC113-203ENST00000561517 ABL1P00519 1130 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 ARSAP15289 507 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 TBXAS1P24557 533 aaPredicted RBP16.36■□□□□ 0.21
CCDC113-203ENST00000561517 YWHAEP62258 255 aaKnown RBP16.36■□□□□ 0.21
CCDC113-203ENST00000561517 KCNH2Q12809 1159 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 EML3Q32P44 896 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 GPRIN1Q7Z2K8 1008 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 MLKLQ8NB16 471 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 CHFRQ96EP1 664 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 DUS2Q9NX74 493 aaKnown RBP16.36■□□□□ 0.21
CCDC113-203ENST00000561517 GMIPQ9P107 970 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 FBXO4Q9UKT5 387 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 SCML2Q9UQR0 700 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 CPQQ9Y646 472 aa16.36■□□□□ 0.21
CCDC113-203ENST00000561517 EP300Q09472 2414 aaPredicted RBP16.35■□□□□ 0.21
CCDC113-203ENST00000561517 COCHO43405 550 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 LAMTOR5O43504 91 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 SP9P0CG40 484 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 CCDC192P0DO97 292 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 IFNAR2P48551 515 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 KIF11P52732 1056 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 CETN1Q12798 172 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 LRMPQ12912 555 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 MTAPQ13126 283 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 PON2Q15165 354 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 ZNF528Q3MIS6 628 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 DGKKQ5KSL6 1271 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 HECTD3Q5T447 861 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 ATP2A3Q93084 1043 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 NT5C1BQ96P26 610 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 ECT2Q9H8V3 914 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCDC113-203ENST00000561517 WNT6Q9Y6F9 365 aa16.35■□□□□ 0.21
CCDC113-203ENST00000561517 TRDMT1O14717 391 aaKnown RBP16.34■□□□□ 0.21
CCDC113-203ENST00000561517 AFPP02771 609 aaKnown RBP16.34■□□□□ 0.21
CCDC113-203ENST00000561517 MBL2P11226 248 aaPredicted RBP16.34■□□□□ 0.21
CCDC113-203ENST00000561517 ACO1P21399 889 aaKnown RBP16.34■□□□□ 0.21
CCDC113-203ENST00000561517 PGFP49763 221 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 AMPD2Q01433 879 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 CCINQ13939 588 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 LRRC32Q14392 662 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 TMEM196Q5HYL7 178 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 DDX42Q86XP3 938 aaKnown RBP eCLIP16.34■□□□□ 0.21
CCDC113-203ENST00000561517 CPA6Q8N4T0 437 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 EHBP1Q8NDI1 1231 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 TTC16Q8NEE8 873 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 ZFRQ96KR1 1074 aaKnown RBP16.34■□□□□ 0.21
CCDC113-203ENST00000561517 UBXN6Q9BZV1 441 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 NUP62CLQ9H1M0 184 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 LINC00597Q9H2U6 94 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 CCSER2Q9H7U1 834 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 PRMT8Q9NR22 394 aaPredicted RBP16.34■□□□□ 0.21
CCDC113-203ENST00000561517 TLR8Q9NR97 1041 aaKnown RBP16.34■□□□□ 0.21
CCDC113-203ENST00000561517 USP3Q9Y6I4 520 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 OTOGLQ3ZCN5 2332 aa16.34■□□□□ 0.21
CCDC113-203ENST00000561517 KIAA1549LQ6ZVL6 1849 aa16.33■□□□□ 0.21
CCDC113-203ENST00000561517 GJA4P35212 333 aa16.33■□□□□ 0.2
CCDC113-203ENST00000561517 GAS6Q14393 721 aa16.33■□□□□ 0.2
CCDC113-203ENST00000561517 IRF2BP1Q8IU81 584 aa16.33■□□□□ 0.2
CCDC113-203ENST00000561517 SYNPOQ8N3V7 929 aa16.33■□□□□ 0.2
CCDC113-203ENST00000561517 ANKRD52Q8NB46 1076 aa16.33■□□□□ 0.2
CCDC113-203ENST00000561517 NELL1Q92832 810 aa16.33■□□□□ 0.2
CCDC113-203ENST00000561517 JAKMIP2Q96AA8 810 aa16.33■□□□□ 0.2
CCDC113-203ENST00000561517 CYLDQ9NQC7 956 aa16.33■□□□□ 0.2
CCDC113-203ENST00000561517 RBM12Q9NTZ6 932 aaKnown RBP16.33■□□□□ 0.2
CCDC113-203ENST00000561517 SMPD4Q9NXE4 827 aa16.33■□□□□ 0.2
CCDC113-203ENST00000561517 E2F8A0AVK6 867 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 SLC9A3R1O14745 358 aaPredicted RBP16.32■□□□□ 0.2
CCDC113-203ENST00000561517 CYP26A1O43174 497 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 TLR5O60602 858 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 NFATC1O95644 943 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 PAEPP09466 180 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 VDRP11473 427 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 GCNT1Q02742 428 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 NR1H3Q13133 447 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 SGO2Q562F6 1265 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 RAB41Q5JT25 222 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 FSTL4Q6MZW2 842 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 GPR179Q6PRD1 2367 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 GVINP1Q7Z2Y8 2422 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 CCDC186Q7Z3E2 898 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 TTC30AQ86WT1 665 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 PPM1KQ8N3J5 372 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 SPEM1Q8N4L4 309 aa16.32■□□□□ 0.2
CCDC113-203ENST00000561517 ZNF276Q8N554 614 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms