RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 AVPR1AP37288 418 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 SOX9P48436 509 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 COPB1P53618 953 aaKnown RBP14.67□□□□□ -0.06
TPM1-230ENST00000561266 YWHAEP62258 255 aaKnown RBP14.67□□□□□ -0.06
TPM1-230ENST00000561266 IQCB1Q15051 598 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 ZNF77Q15935 545 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 CNGA2Q16280 664 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 RAB41Q5JT25 222 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 SNX30Q5VWJ9 437 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 TRIM68Q6AZZ1 485 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 LCLAT1Q6UWP7 414 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 FBXL6Q8N531 539 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 CELF5Q8N6W0 485 aaKnown RBP14.67□□□□□ -0.06
TPM1-230ENST00000561266 TMEM105Q8N8V8 129 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 BPIFB1Q8TDL5 484 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 DEPDC1BQ8WUY9 529 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 SHC3Q92529 594 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 ZFRQ96KR1 1074 aaKnown RBP14.67□□□□□ -0.06
TPM1-230ENST00000561266 SLITRK1Q96PX8 696 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 FOXQ1Q9C009 403 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 BRD9Q9H8M2 597 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 ARHGEF3Q9NR81 526 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 GKN1Q9NS71 199 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 GTSE1Q9NYZ3 720 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 CYTH4Q9UIA0 394 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 NUDT5Q9UKK9 219 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.67□□□□□ -0.06
TPM1-230ENST00000561266 SCML2Q9UQR0 700 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 ATG2BQ96BY7 2078 aa14.67□□□□□ -0.06
TPM1-230ENST00000561266 A0A1W2PQH9 124 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 SOBPA7XYQ1 873 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 PIK3R2O00459 728 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 DPYSL4O14531 572 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 MDM4O15151 490 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 CHADO15335 359 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 USP17L7P0C7H9 530 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 KRT5P13647 590 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 ARSAP15289 507 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 CLCN1P35523 988 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 RGS7P49802 495 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 MFAP3P55082 362 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 USP4Q13107 963 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 ZNF268Q14587 947 aaPredicted RBP14.66□□□□□ -0.06
TPM1-230ENST00000561266 MLF2Q15773 248 aaPredicted RBP14.66□□□□□ -0.06
TPM1-230ENST00000561266 KLHDC7AQ5VTJ3 777 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 PMF1Q6P1K2 205 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 DENND1BQ6P3S1 775 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 FLCNQ8NFG4 579 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 SH3RF2Q8TEC5 729 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 SLC35F5Q8WV83 523 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 OVCA2Q8WZ82 227 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 SECISBP2LQ93073 1101 aaKnown RBP14.66□□□□□ -0.06
TPM1-230ENST00000561266 CHFRQ96EP1 664 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 FAM83CQ9BQN1 747 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 LSM14BQ9BX40 385 aaKnown RBP14.66□□□□□ -0.06
TPM1-230ENST00000561266 NAA15Q9BXJ9 866 aaKnown RBP14.66□□□□□ -0.06
TPM1-230ENST00000561266 GANQ9H2C0 597 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 LINC00597Q9H2U6 94 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 TBC1D17Q9HA65 648 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 PNPLA8Q9NP80 782 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 HPS4Q9NQG7 708 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 COMMD8Q9NX08 183 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 SMPD4Q9NXE4 827 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 OBP2AQ9NY56 170 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 SIK3Q9Y2K2 1263 aa14.66□□□□□ -0.06
TPM1-230ENST00000561266 LEFTY2O00292 366 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 PES1O00541 588 aaKnown RBP14.65□□□□□ -0.06
TPM1-230ENST00000561266 ZNF263O14978 683 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 XPO1O14980 1071 aaKnown RBP14.65□□□□□ -0.06
TPM1-230ENST00000561266 CKMP06732 381 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 GLULP15104 373 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 AVPR2P30518 371 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 BCAT1P54687 386 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 STARD6P59095 220 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 SLC7A9P82251 487 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 BST2Q10589 180 aaKnown RBP14.65□□□□□ -0.06
TPM1-230ENST00000561266 NAIF1Q69YI7 327 aaPredicted RBP14.65□□□□□ -0.06
TPM1-230ENST00000561266 ZNF687Q8N1G0 1237 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 TTC16Q8NEE8 873 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 ZNF606Q8WXB4 792 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 E2F7Q96AV8 911 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 BPIFA3Q9BQP9 254 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 DDX23Q9BUQ8 820 aaKnown RBP14.65□□□□□ -0.06
TPM1-230ENST00000561266 ULBP1Q9BZM6 244 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 UBXN6Q9BZV1 441 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 KIAA1257Q9ULG3 409 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 ARHGAP26Q9UNA1 814 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 CPQQ9Y646 472 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 WNT6Q9Y6F9 365 aa14.65□□□□□ -0.06
TPM1-230ENST00000561266 CACNA1IQ9P0X4 2223 aa14.64□□□□□ -0.07
TPM1-230ENST00000561266 LRRC10BA6NIK2 292 aa14.64□□□□□ -0.07
TPM1-230ENST00000561266 M0QYV0 167 aa14.64□□□□□ -0.07
TPM1-230ENST00000561266 TEX33O43247 280 aa14.64□□□□□ -0.07
TPM1-230ENST00000561266 LETM1O95202 739 aaPredicted RBP14.64□□□□□ -0.07
TPM1-230ENST00000561266 USP8P40818 1118 aa14.64□□□□□ -0.07
TPM1-230ENST00000561266 GPD2P43304 727 aa14.64□□□□□ -0.07
TPM1-230ENST00000561266 PLA2G4AP47712 749 aa14.64□□□□□ -0.07
TPM1-230ENST00000561266 PPP3CCP48454 512 aa14.64□□□□□ -0.07
TPM1-230ENST00000561266 ZNF165P49910 485 aa14.64□□□□□ -0.07
TPM1-230ENST00000561266 TKTL1P51854 596 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms