RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CMTM8Q8IZV2 173 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 SHKBP1Q8TBC3 707 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 STK32AQ8WU08 396 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 KCTD13Q8WZ19 329 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 IRGQQ8WZA9 623 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 IRF7Q92985 503 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 C18orf8Q96DM3 657 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 DDX50Q9BQ39 737 aaKnown RBP11.26□□□□□ -0.61
TPM1-229ENST00000561242 CRISPLD1Q9H336 500 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 CYLDQ9NQC7 956 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 TDP1Q9NUW8 608 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 SORCS3Q9UPU3 1222 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 CNTN6Q9UQ52 1028 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 SIK3Q9Y2K2 1263 aa11.26□□□□□ -0.61
TPM1-229ENST00000561242 TNRC18O15417 2968 aaPredicted RBP11.26□□□□□ -0.61
TPM1-229ENST00000561242 PTPRSQ13332 1948 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 A0A1W2PQJ5 194 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 AKR1B15C9JRZ8 316 aaPredicted RBP11.25□□□□□ -0.61
TPM1-229ENST00000561242 RNF225M0QZC1 329 aaPredicted RBP11.25□□□□□ -0.61
TPM1-229ENST00000561242 ECI2O75521 394 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 F11P03951 625 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 CALB1P05937 261 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 PSMC3P17980 439 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 HARS2P49590 506 aaKnown RBP11.25□□□□□ -0.61
TPM1-229ENST00000561242 KIF11P52732 1056 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 EPHA5P54756 1037 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 CDK17Q00537 523 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 CDR2Q01850 454 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 APBA1Q02410 837 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 ZP2Q05996 745 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 ARHGAP29Q52LW3 1261 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 FIGNQ5HY92 759 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 CCDC186Q7Z3E2 898 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 TMC6Q7Z403 805 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 ARL14EPQ8N8R7 260 aaPredicted RBP11.25□□□□□ -0.61
TPM1-229ENST00000561242 OR8K1Q8NGG5 319 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 SCAMP5Q8TAC9 235 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 BPIFB1Q8TDL5 484 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 ELSPBP1Q96BH3 223 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 TCEAL4Q96EI5 215 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 TRIM11Q96F44 468 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 MYADMQ96S97 322 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 AGPAT1Q99943 283 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 TTLL2Q9BWV7 592 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 ULBP1Q9BZM6 244 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 DCLK3Q9C098 648 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 GANQ9H2C0 597 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 KCNK12Q9HB15 430 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 SIX2Q9NPC8 291 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 OBP2AQ9NY56 170 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 CLIC5Q9NZA1 410 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 GMIPQ9P107 970 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 TBC1D14Q9P2M4 693 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 RASAL2Q9UJF2 1139 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 STAP1Q9ULZ2 295 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 PCDHGC3Q9UN70 934 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 ZNF510Q9Y2H8 683 aa11.25□□□□□ -0.61
TPM1-229ENST00000561242 MRPS17Q9Y2R5 130 aaKnown RBP11.25□□□□□ -0.61
TPM1-229ENST00000561242 GBF1Q92538 1859 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 ZNF840PA6NDX5 716 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 LRRC53A6NM62 1247 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 HEPACAM2A8MVW5 462 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 LOC730098B7Z3J9 87 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 TNFRSF10AO00220 468 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 PIK3R2O00459 728 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 NCAM2O15394 837 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 DCXO43602 365 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 TLR5O60602 858 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 CYBBP04839 570 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 SERPING1P05155 500 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 NCAM1P13591 858 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 HMGA1P17096 107 aaKnown RBP11.24□□□□□ -0.61
TPM1-229ENST00000561242 TUBP50607 506 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 ZNF132P52740 706 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 RNASE9P60153 205 aaKnown RBP11.24□□□□□ -0.61
TPM1-229ENST00000561242 MTA1Q13330 715 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 FAM78AQ5JUQ0 283 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 PRSS36Q5K4E3 855 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 DENND1BQ6P3S1 775 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 C1orf228Q6PIY5 440 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 PAQR9Q6ZVX9 377 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 RNF135Q8IUD6 432 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 TXLNBQ8N3L3 684 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 C1orf131Q8NDD1 294 aaKnown RBP11.24□□□□□ -0.61
TPM1-229ENST00000561242 TFAP2BQ92481 460 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 CCDC42Q96M95 316 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 KXD1Q9BQD3 176 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 SELENOOQ9BVL4 669 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 ZNF334Q9HCZ1 680 aaPredicted RBP11.24□□□□□ -0.61
TPM1-229ENST00000561242 CAPN11Q9UMQ6 739 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 NUMBLQ9Y6R0 609 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 ITIH6Q6UXX5 1313 aa11.24□□□□□ -0.61
TPM1-229ENST00000561242 NLRC5Q86WI3 1866 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 A0A1W2PQH9 124 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 SLC12A8A0AV02 714 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 AKR1B10O60218 316 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 BEST1O76090 585 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 VNN2O95498 520 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 NFATC1O95644 943 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms